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scnpilot_solids1_trim150_scaffold_1428

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1428_1
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(120..1256)
DNA (1137bp) protein (379aa)
Putrescine ABC transporter, ATP-binding protein (EC:3.6.3.-) rbh
Spermidine/putrescine ABC transporter ATPase subunit n=1 Tax=Mycobacterium tusciae JS617 RepID=H1JXK0_9MYCO rbh
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
scnpilot_solids1_trim150_scaffold_1428_2
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(1302..2291)
DNA (990bp) protein (330aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Mycobacterium tusciae JS617 RepID=H1JXK4_9MYCO
polyamine ABC-transporter inner membrane subunit; K11070 spermidine/putrescine transport system permease protein
Tax=RBG_16_Actinobacteria_67_10_curated
scnpilot_solids1_trim150_scaffold_1428_3
Mycobacterium rhodesiae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2335..3219)
DNA (885bp) protein (295aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Mycobacterium rhodesiae JS60 RepID=G4HXW4_MYCRH
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EHB56456.1}; TaxID=931627 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium rhodesiae JS60.;"
polyamine ABC transporter permease; K11071 spermidine/putrescine transport system permease protein
scnpilot_solids1_trim150_scaffold_1428_4
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(3230..4132)
DNA (903bp) protein (301aa)
Extracellular solute-binding protein family 1 n=1 Tax=Mycobacterium rhodesiae JS60 RepID=G4HXW3_MYCRH
extracellular solute-binding protein family 1
Tax=RBG_16_Actinobacteria_67_10_curated
scnpilot_solids1_trim150_scaffold_1428_5
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(4507..5127)
DNA (621bp) protein (207aa)
Regulatory protein TetR n=1 Tax=Mycobacterium rhodesiae JS60 RepID=G4HXW0_MYCRH
TetR family transcriptional regulator
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
scnpilot_solids1_trim150_scaffold_1428_6
Streptomyces sp. NRRL S-104, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5221..5841)
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI00036A1B58
TetR family transcriptional regulator {ECO:0000313|EMBL:KJY17840.1}; TaxID=1609135 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-104.;"
TetR family transcriptional regulator
scnpilot_solids1_trim150_scaffold_1428_7
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(5852..6580)
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZV8_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB49934.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids1_trim150_scaffold_1428_8
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(6848..8446)
DNA (1599bp) protein (533aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036034CC rbh
putative dehydrogenase/oxidoreductase rbh
Putative dehydrogenase/oxidoreductase {ECO:0000313|EMBL:BAL99912.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
scnpilot_solids1_trim150_scaffold_1428_9
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(8443..9645)
DNA (1203bp) protein (401aa)
Rieske (2Fe-2S) iron-sulfur domain protein n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8QZF7_ISOPI rbh
Rieske (2Fe-2S) domain-containing protein; K00479 Rieske 2Fe-2S family protein rbh
Tax=RBG_16_RIF_CHLX_69_14_curated
scnpilot_solids1_trim150_scaffold_1428_10
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

9767..10942
DNA (1176bp) protein (392aa)
acyl-CoA dehydrogenase (EC:1.3.99.-) rbh
Acyl-CoA dehydrogenase domain-containing protein id=4729354 bin=GWC2_Chloroflexi_73_18 species=Streptomyces violaceusniger genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good + rbh
Tax=GWC2_RIF_CHLX_73_18_curated
scnpilot_solids1_trim150_scaffold_1428_11
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10953..13466
DNA (2514bp) protein (838aa)
6-carboxyhexanoate-CoA ligase (EC:6.2.1.14)
hypothetical protein, partial n=1 Tax=Cupriavidus sp. WS RepID=UPI00036B02A9
CoA-binding protein {ECO:0000313|EMBL:EZP48723.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
scnpilot_solids1_trim150_scaffold_1428_12
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(13493..14884)
DNA (1392bp) protein (464aa)
Aminotransferase class-III n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F5V3_CONWI rbh
class III aminotransferase rbh
Aminotransferase class-III {ECO:0000313|EMBL:ADB52652.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids1_trim150_scaffold_1428_13
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14967..16625
DNA (1659bp) protein (553aa)
FAD dependent oxidoreductase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HG29_ANADF rbh
FAD dependent oxidoreductase rbh
FAD dependent oxidoreductase {ECO:0000313|EMBL:ABS27675.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
scnpilot_solids1_trim150_scaffold_1428_14
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16582..17346)
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5WCW6_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ45776.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
Displaying 14 items

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