ggKbase home page

scnpilot_solids1_trim150_scaffold_1428_11

Organism: SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9

near complete RP 50 / 55 MC: 3 BSCG 49 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: 10953..13466

Top 3 Functional Annotations

Value Algorithm Source
6-carboxyhexanoate-CoA ligase (EC:6.2.1.14) similarity KEGG
DB: KEGG
  • Identity: 31.1
  • Coverage: 585.0
  • Bit_score: 192
  • Evalue 6.00e-46
hypothetical protein, partial n=1 Tax=Cupriavidus sp. WS RepID=UPI00036B02A9 similarity UNIREF
DB: UNIREF100
  • Identity: 35.4
  • Coverage: 520.0
  • Bit_score: 205
  • Evalue 2.20e-49
CoA-binding protein {ECO:0000313|EMBL:EZP48723.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 30.3
  • Coverage: 742.0
  • Bit_score: 205
  • Evalue 3.10e-49

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingomonas sp. RIT328 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2514
GTGCGGCAGGCGCCCGACCTCACCCCCCTGCTGCAGCCCCGCTCGGTCGCGGTGGTCGGCGCCAACGACCGGCCCGGGTCCTACGGCGACGTGATCTTCCGCAACCTCGCGGCCGCCGGGTTCGAGGGCGCGGTCTGGGGCGTGAACCCGAGGCGCGAGGAGGTCCACGGCCGGCCCTGCGTACCGCGCGTCGCCGACCTGCCCGAGCCGGTCGACGCGGTCGTCGTCGCGATCCCGGCGGCGGGGTGCCCGTCGGTGATCGCCGAAGCGGGGGCGCGCGGCTGCGGCGGCGCGATCGTCCTCGCCGCGGGCTTCGGCGAGACGCCCGGCGGGCGGCCGCTGGAAGCCGAGCTGCGCGAGGCCGCCGCGCGGACCGGGCTGGCGGTCTGCGGGCCGAACGGCAACGGCATCGTCGCGACGGCGGCGCGGGCGCCGCTCTGGGGCGACTCGGTCGAGCGCCTCGCCCCCGGTCCGGTCGCCGTCATCACCCAGAGCGGCAACTTCGGCGTCAACGCGCTCGGCTCCGATCGCGGCATCGGCTTCCACACGGTCGTCTCGACCGGCAACGGCGCGGTGCTCGAACCGAGTGACTGGCTCGCGGCCCTGGCGGCGACCGACGGCGTCGGCTCGATCGCCCTGATGCTCGAGTCCGACGGCGACGGTGCCAAGCTCGCCCGCGCGCTCGCCGACTGCGCCGAGCGCGGCATCGGCGTCGCGGTGCTGAAGGTCGGCAGCTCGGCGGGCGGCGCCCGCGCGGCGGGCGCCCACACCGGGGCGCTGGCCGGCGACCAGCGCGTCTTCGCGGCGCTGCTGAAGGAAGCCGGCGCGGCCCAGGCGAGCGAGCCGAGCGAGCTCCTGGAGCTGGCCCGAGCGCTCGCGATCGGCCCGGCCGCGCCGACGCGGGCCGATGCCGCGCGCGAGCCCACCGAGCGCGGTCGTCCTTTGGCCCGGCCGACGGGCGGCGGTCGTCCTTTCGGCCGCCTACCGGACCTTAGGTCGACCGCGCCGACGGCGAGCGGACGGAAGGACGACCGCGGCGCGGCTCTTCGCTCGGCGCGGCCGTCGCGGCGGGGTGGGCTCGCGATCCTCACCTGCTCGGGCGGGGACTCGGGGATGGCGGCGGACCTCGCGGAGGCGCGCGGGCTGGCGCTGCCGGAGCTCTCGCCGGCGACGCGCGAGCGGCTCGCCGCGGTGCTGCCGAGCGCGGCGACGGTGGCGAACCCGCTCGACTACACGTCGATGCTCTGGGACGACCGCGCGGCGCTGGAGGAGGTCGCGGCGGCGGTGTCCTCGGACCCGGCGATCGACCAGCTGCTGGTGCTCTTCGACCAGCCGCGCGGCCTCGACCCCGAGATCGCCGCCGACTGGGAAGCGGTGAGGCGCGCGCTCCTCGCCGGCGCCGCGCGAGGCGACGCCGCGACGATCCTCGGCTCGACCCTGCCCGAGCTGCTCGACCCGGACGGCGCCGCGGAGCTCGCCGCCGGCGGCGTCGCGACCGCCGCCGGCCTCGGCGCCGCGATCGCCTGCGCCGCCGCCCTCCGCATTCCGCCGGTCGACCCGAAGCGGCTGCGGGAGATCGCCGCGGCGGCGGAAAGCGGAGAGGGGAGTTGGGCCATCCGCTCTCAGGACGCCGAGACGAAAGGCGCAACGGACGCGGGGCAGCGGGATGGCAAGCCGGACGAGACAGGCGAGGCGCGAGCGGAGAGCGACGCGGGCGCCGGAAGCGACGGCGGGACGGGAAGCGACGGCGGGGCGGAGAGCGACCCGGGCGCGGGAAGCGACGGCGGGGCGGAGAGCGGAGCGGGCACGCACGGAGGTGGCGACCGGCGTGGCACTTCGTCGAGCGGGGCCGCGGGGATCGCGTCCCAGGACGGGTGGCTCGGAGAGGCGGAGGCGAAGCGGCTGCTGGCCGCGGGTGGCCTTGACGTGCCCGCCGGGGCGACCGCCGGCGACATCGCGGGGGCCGTCGACGCGGCGCTGGAGGTCGGCGTGCCGGTGGCGCTGAAGCTCTCCTCCCCGTCGCTGCTGCACAAGACCGAGGCCGGCGCGCTGGCACTCGACCTCCGCGACGAGGACGAGGTGCGGGAGGCGGCGGCGGCGCTGCTCGCGCTGCCGGAGGCTGCCGACGCGACGCTCCTGGTCGAGCGGATGGCGGGCAAGGGGACCGAGCTGATCTTCGCGGTGCGCCGAGACGCCGTCGTCCCGGCGCTCCTGGTCGGGATCGGCGGGATCTGGGCCGAGGCGCTCNNNNNNNNTCCCCGCCTCGCCCGTCCGGGTCGAGCGCGCGCTGCGCGGCCTGCGCGCCGCGCCGCTGCTGACCGGAGCGCGCGGCGGCCCGGCGGTGGACCTCGCCGCCGCGTCCCGCTTCGGCTCGCGCCTCGGCGAGCTCGCCCTGGAGCACGACCTCGACCTGCTCGAGGTCAACCCCGCTCTCGCCTCCCCTCGCGGCTGCGTCGCGCTAGATGCCCTCGCCCGCCGCACCCCATGTTGATGGGCCGAAAAGTAAAGCTATAG
PROTEIN sequence
Length: 838
VRQAPDLTPLLQPRSVAVVGANDRPGSYGDVIFRNLAAAGFEGAVWGVNPRREEVHGRPCVPRVADLPEPVDAVVVAIPAAGCPSVIAEAGARGCGGAIVLAAGFGETPGGRPLEAELREAAARTGLAVCGPNGNGIVATAARAPLWGDSVERLAPGPVAVITQSGNFGVNALGSDRGIGFHTVVSTGNGAVLEPSDWLAALAATDGVGSIALMLESDGDGAKLARALADCAERGIGVAVLKVGSSAGGARAAGAHTGALAGDQRVFAALLKEAGAAQASEPSELLELARALAIGPAAPTRADAAREPTERGRPLARPTGGGRPFGRLPDLRSTAPTASGRKDDRGAALRSARPSRRGGLAILTCSGGDSGMAADLAEARGLALPELSPATRERLAAVLPSAATVANPLDYTSMLWDDRAALEEVAAAVSSDPAIDQLLVLFDQPRGLDPEIAADWEAVRRALLAGAARGDAATILGSTLPELLDPDGAAELAAGGVATAAGLGAAIACAAALRIPPVDPKRLREIAAAAESGEGSWAIRSQDAETKGATDAGQRDGKPDETGEARAESDAGAGSDGGTGSDGGAESDPGAGSDGGAESGAGTHGGGDRRGTSSSGAAGIASQDGWLGEAEAKRLLAAGGLDVPAGATAGDIAGAVDAALEVGVPVALKLSSPSLLHKTEAGALALDLRDEDEVREAAAALLALPEAADATLLVERMAGKGTELIFAVRRDAVVPALLVGIGGIWAEALXXXPRLARPGRARAARPARRAAADRSARRPGGGPRRRVPLRLAPRRARPGARPRPARGQPRSRLPSRLRRARCPRPPHPMLMGRKVKL*