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scnpilot_solids1_trim150_scaffold_1199_22

Organism: SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9

near complete RP 50 / 55 MC: 3 BSCG 49 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: 18363..19031

Top 3 Functional Annotations

Value Algorithm Source
Variovorax paradoxus strain MEDvA23 contig_5, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ36871.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 34.9
  • Coverage: 209.0
  • Bit_score: 103
  • Evalue 4.30e-19
Putative uncharacterized protein id=3718327 bin=GWC2_Nitrospirae-rel_56_14 species=Collimonas fungivorans genus=Collimonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA similarity UNIREF
DB: UNIREF100
  • Identity: 34.3
  • Coverage: 216.0
  • Bit_score: 102
  • Evalue 4.00e-19
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 32.2
  • Coverage: 149.0
  • Bit_score: 81
  • Evalue 4.00e-13

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 669
ATGTCCCGGCGCGCGACCAACCGCCTCGTCCTCGTGGGCGCGATCCGGCGGGCGGCCGGACGGCTGATCGGCGGGCCGGCGCTTGCGGCGCTCGTCGTCCTCATCATGGCCATCGCGGCTCCCCCTGCCGCCGCCGGGCCCCGGGCCCTCTACGTCGGCGACGGCGTCGCCGGCAGCCCCGGCGCGCTCTGGCAGTTCTCGCTCCGGGCGGGCGGCCTGCCGGTGCCGCTGCCCTCGCCCGCCGTCGTCGCCGGCGAAGACGCCAAGCACATCGCGCTCACCGCGGACGGGCGCTTCGCCTACGCGACCGGCGGCGCCGACGGCCTCGTCTACGCCTACCGGGTGCTGCCCGGGCTCGGCCGGCTGGTCCCGCTCGAAGGAGCCCCGCCGAACGCCGGGGTCGGGGCGCACGGCGTCGCCGTCTCCCCTTCGGGCGACGCGGTCTACGTCGCCGCGCAGGAACCGGGGACCGTCTCCCAGTACGGGGTCGACCCGCGGACCGGCGCCCTGCACCCGCTGCAGCCCGCCGCCCTTCCGGCCGGCGCCGGGGCCTCCGGCGTGGCGATCGCGCCGGACGGAGGCTCCGCCTACGTCACCAACCTCGAAGCGGGCTCGATCAGCCAGTACGACATCGACCCCGGGACCGGCGCCCTCAGCCCGAAGTCGCCG
PROTEIN sequence
Length: 223
MSRRATNRLVLVGAIRRAAGRLIGGPALAALVVLIMAIAAPPAAAGPRALYVGDGVAGSPGALWQFSLRAGGLPVPLPSPAVVAGEDAKHIALTADGRFAYATGGADGLVYAYRVLPGLGRLVPLEGAPPNAGVGAHGVAVSPSGDAVYVAAQEPGTVSQYGVDPRTGALHPLQPAALPAGAGASGVAIAPDGGSAYVTNLEAGSISQYDIDPGTGALSPKSP