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scnpilot_solids1_trim150_scaffold_1199

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1199_1
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(3..521)
DNA (519bp) protein (173aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:ADB48741.1}; EC=2.3.1.9 {ECO:0000313|EMBL:ADB48741.1};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Acetyl-CoA acetyltransferase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F668_CONWI
scnpilot_solids1_trim150_scaffold_1199_2
RBG_16_Actinobacteria_70_17_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

569..1816
DNA (1248bp) protein (416aa)
riBBA; riboflavin biosynthesis protein ribBA; K14652 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] rbh
Riboflavin biosynthesis protein RibBA n=1 Tax=uncultured bacterium A1Q1_fos_862 RepID=L7VZM5_9BACT rbh
Tax=RBG_16_Actinobacteria_70_17_curated
scnpilot_solids1_trim150_scaffold_1199_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

1813..2814
DNA (1002bp) protein (334aa)
phosphotriesterase n=1 Tax=Mycobacterium hassiacum RepID=UPI00037E99FA
putative metal-dependent hydrolase with the TIM-barrel fold; K07048 phosphotriesterase-related protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
scnpilot_solids1_trim150_scaffold_1199_4
unknown

Not on your lists

2826..3128
DNA (303bp) protein (101aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1199_5
Rhodococcus imtechensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3128..3607
DNA (480bp) protein (160aa)
NADH-dependent flavin oxidoreductase; K14631 flavin reductase ActVB [EC:1.5.1.-]
NADH-dependent flavin oxidoreductase n=1 Tax=Rhodococcus imtechensis RKJ300 = JCM 13270 RepID=I0WKT4_9NOCA
NADH-dependent flavin oxidoreductase {ECO:0000313|EMBL:EID77000.1}; TaxID=1165867 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus imtechensis RKJ300 = JCM 13270.;"
scnpilot_solids1_trim150_scaffold_1199_6
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

3607..4002
DNA (396bp) protein (132aa)
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:EHN10961.1}; EC=6.2.1.3 {ECO:0000313|EMBL:EHN10961.1};; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
lcfB; Long-chain-fatty-acid-CoA ligase (EC:6.2.1.3)
Long-chain-fatty-acid--CoA ligase n=1 Tax=Patulibacter medicamentivorans RepID=H0E5U1_9ACTN
scnpilot_solids1_trim150_scaffold_1199_7
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3999..5159
DNA (1161bp) protein (387aa)
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:CCH79439.1}; EC=6.2.1.3 {ECO:0000313|EMBL:CCH79439.1};; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
AMP-dependent synthetase and ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3]
Long-chain-fatty-acid--CoA ligase n=1 Tax=Patulibacter medicamentivorans RepID=H0E7Q1_9ACTN
scnpilot_solids1_trim150_scaffold_1199_8
RBG_13_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

Not on your lists

5163..5729
DNA (567bp) protein (189aa)
Carboxymuconolactone decarboxylase family protein 1 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HUE9_ACHXA
hypothetical protein
Tax=RBG_13_Chloroflexi_50_10_curated
scnpilot_solids1_trim150_scaffold_1199_9
Methanofollis liminatans, Methanofollis, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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5736..6116
DNA (381bp) protein (127aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Methanofollis liminatans DSM 4140 RepID=J1L6F4_9EURY
hypothetical protein
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:EJG08385.1}; TaxID=28892 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanofollis.;" source="Methanofollis liminatans DSM 4140.;"
scnpilot_solids1_trim150_scaffold_1199_10
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

6120..7259
DNA (1140bp) protein (380aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Patulibacter medicamentivorans RepID=H0EBJ4_9ACTN rbh
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:EHN08941.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
acyl-CoA dehydrogenase rbh
scnpilot_solids1_trim150_scaffold_1199_11
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

7270..8226
DNA (957bp) protein (319aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Patulibacter medicamentivorans RepID=H0EBJ5_9ACTN rbh
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:EHN08942.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
acyl-CoA dehydrogenase rbh
scnpilot_solids1_trim150_scaffold_1199_12
Nocardia brasiliensis, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8239..8850)
DNA (612bp) protein (204aa)
Carboxymuconolactone decarboxylase family protein n=1 Tax=Polaromonas sp. CF318 RepID=J2TYR0_9BURK
Uncharacterized protein {ECO:0000313|EMBL:GAJ80927.1}; TaxID=1206724 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia brasiliensis NBRC 14402.;"
carboxymuconolactone decarboxylase
scnpilot_solids1_trim150_scaffold_1199_13
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8869..9942)
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3IVA9_FRASU
hypothetical protein; K10439 ribose transport system substrate-binding protein
Uncharacterized protein {ECO:0000313|EMBL:ADP81273.1}; Flags: Precursor;; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
scnpilot_solids1_trim150_scaffold_1199_14
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9966..10973)
DNA (1008bp) protein (336aa)
Inner-membrane translocator n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3IVB2_FRASU rbh
inner-membrane translocator; K10440 ribose transport system permease protein rbh
Inner-membrane translocator {ECO:0000313|EMBL:ADP81276.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
scnpilot_solids1_trim150_scaffold_1199_15
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10960..12549)
DNA (1590bp) protein (530aa)
ABC transporter related protein n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3IVB1_FRASU rbh
ABC transporter rbh
ABC transporter related protein {ECO:0000313|EMBL:ADP81275.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
scnpilot_solids1_trim150_scaffold_1199_16
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12622..13122)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CM06_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA22493.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
scnpilot_solids1_trim150_scaffold_1199_17
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13160..14263)
DNA (1104bp) protein (368aa)
zinc-binding alcohol dehydrogenase; K00055 aryl-alcohol dehydrogenase [EC:1.1.1.90]
Alcohol dehydrogenase, zinc-binding protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AV61_RUBXD
Alcohol dehydrogenase, zinc-binding protein {ECO:0000313|EMBL:ABG04717.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
scnpilot_solids1_trim150_scaffold_1199_18
unknown

Not on your lists

14562..15377
DNA (816bp) protein (272aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1199_19
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15745..16599)
DNA (855bp) protein (285aa)
short chain dehydrogenase (EC:1.1.1.-) rbh
Short chain dehydrogenase n=2 Tax=Rhodococcus RepID=K8XMI5_RHOOP rbh
Short chain dehydrogenase {ECO:0000313|EMBL:EKT82619.1}; TaxID=1129896 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus M213.;"
scnpilot_solids1_trim150_scaffold_1199_20
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16581..17165)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Saccharomonospora marina XMU15 RepID=H5WXK4_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:EHR50607.1}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
carboxymuconolactone decarboxylase
scnpilot_solids1_trim150_scaffold_1199_21
Mycobacterium llatzerense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17624..18271)
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Mycobacterium sp. 360MFTsu5.1 RepID=UPI0003719BFC
Mycobacterium llatzerense strain CLUC14 Mllat_contig000048, whole genome shotgun sequence {ECO:0000313|EMBL:KIU14257.1}; TaxID=280871 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium llatzerense.;"
TetR family transcriptional regulator
scnpilot_solids1_trim150_scaffold_1199_22
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18363..19031
DNA (669bp) protein (223aa)
Variovorax paradoxus strain MEDvA23 contig_5, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ36871.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
Putative uncharacterized protein id=3718327 bin=GWC2_Nitrospirae-rel_56_14 species=Collimonas fungivorans genus=Collimonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
hypothetical protein
Displaying 22 items

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