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scnpilot_solids1_trim150_scaffold_2679_2

Organism: SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9

near complete RP 50 / 55 MC: 3 BSCG 49 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: 1166..1657

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZ55_RUBXD similarity UNIREF
DB: UNIREF100
  • Identity: 41.8
  • Coverage: 165.0
  • Bit_score: 133
  • Evalue 2.10e-28
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 41.8
  • Coverage: 165.0
  • Bit_score: 133
  • Evalue 6.50e-29
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABG03323.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.8
  • Coverage: 165.0
  • Bit_score: 133
  • Evalue 2.90e-28

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Taxonomy

Rubrobacter xylanophilus → Rubrobacter → Rubrobacterales → Rubrobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 492
ATGTCCGAGCTGCTCGGCATCCAGAAGGCCTCCCTTTACCACCACATCGGCAGCAAGGAAGACCTCCTGTATTCGATCTGCATGGGTGCGACCACCGGTGTGCTCGAGGACGTGAGGGAGGCGATCGCCGCGGCGCCCCCGGAGGAACGCCTACGCGAGGCGATCAAGGCCCACATCGTGAGCGTGATCCGCGACAGCGACCTCCACGCGGTCCTCCAGTTCGAGTGGCGCGCGCTGTCCGAGGAGCGGGGCGAGGAGATCTCGGAGATCCGGCGGGAACTTCACAGCGAACTGCGTCGACTGATCGAAAGCGACCGCAAGGCGGGGCGCCTGCGGACCGACGTCTCGGTGAAATACATCTCGCTGACCCTGATGAACCTGCTCAGCTGGGCACTCTTCTCCTTCGACGAAGCCGGCACCGAATCCCCCGCGAAGTTCGGCGACACCCTCGCGCTCCTCTTCCTCGAAGGCGCGCAGGGCACCCCCGCCTAA
PROTEIN sequence
Length: 164
MSELLGIQKASLYHHIGSKEDLLYSICMGATTGVLEDVREAIAAAPPEERLREAIKAHIVSVIRDSDLHAVLQFEWRALSEERGEEISEIRRELHSELRRLIESDRKAGRLRTDVSVKYISLTLMNLLSWALFSFDEAGTESPAKFGDTLALLFLEGAQGTPA*