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scnpilot_solids1_trim150_scaffold_2479

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2479_1
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(3..587)
DNA (585bp) protein (195aa)
Major facilitator superfamily MFS_1 n=1 Tax=Niabella soli DSM 19437 RepID=H1NJW4_9SPHI
Major facilitator transporter {ECO:0000313|EMBL:AHF14090.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
L-fucose transporter; K02429 MFS transporter, FHS family, L-fucose permease
scnpilot_solids1_trim150_scaffold_2479_2
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(607..2370)
DNA (1764bp) protein (588aa)
L-fucose isomerase {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SAAS00040911}; Short=FucIase {ECO:0000256|HAMAP-Rule:MF_01254};; EC=5.3.1.25 {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SAAS00040955};; 6-deoxy-L-galactose isomerase {ECO:0000256|HAMAP-Rule:MF_01254}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
L-fucose isomerase; K01818 L-fucose isomerase [EC:5.3.1.25]
L-fucose isomerase n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C902_SPHS2
scnpilot_solids1_trim150_scaffold_2479_3
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2384..3631)
DNA (1248bp) protein (416aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036A6FE1 rbh
Uncharacterized protein {ECO:0000313|EMBL:ETZ22266.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2479_4
RBG_13_Bacteroidetes_43_22_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(3655..4836)
DNA (1182bp) protein (394aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036199A5 rbh
hypothetical protein rbh
Tax=RBG_13_Bacteroidetes_43_22_curated
scnpilot_solids1_trim150_scaffold_2479_5
unknown

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comp(5136..5324)
DNA (189bp) protein (63aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2479_6
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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5417..5782
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PQQ3_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU60676.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids1_trim150_scaffold_2479_7
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(5922..6200)
DNA (279bp) protein (93aa)
XRE family transcriptional regulator id=4923351 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
XRE family transcriptional regulator
Tax=GWA2_Bacteroidetes_32_17_curated
scnpilot_solids1_trim150_scaffold_2479_8
GWA2_Bacteroidetes_30_7_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(6205..6579)
DNA (375bp) protein (125aa)
Uncharacterized protein id=4524529 bin=GWF2_Bacteroidetes_38_335 species=unknown genus=unknown taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
hypothetical protein
Tax=GWA2_Bacteroidetes_30_7_curated
scnpilot_solids1_trim150_scaffold_2479_9
unknown

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comp(6634..7095)
DNA (462bp) protein (154aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2479_10
unknown

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comp(7106..7267)
DNA (162bp) protein (54aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2479_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(7718..9790)
DNA (2073bp) protein (691aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TC19_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV99312.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Displaying 11 items

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