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scnpilot_solids1_trim150_scaffold_2659

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2659_1
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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128..1177
DNA (1050bp) protein (350aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
S-adenosylmethionine--tRNA ribosyltransferase-isomerase; K07568 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:5.-.-.-]
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9V1_NIAKG
scnpilot_solids1_trim150_scaffold_2659_trna_1
unknown

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1376..1449
DNA (74bp)
transferRNA Thr
scnpilot_solids1_trim150_scaffold_2659_trna_2
unknown

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1496..1578
DNA (83bp)
transferRNA Tyr
scnpilot_solids1_trim150_scaffold_2659_trna_3
unknown

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1795..1866
DNA (72bp)
transferRNA Thr
scnpilot_solids1_trim150_scaffold_2659_trna_4
unknown

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2000..2072
DNA (73bp)
transferRNA Gly
scnpilot_solids1_trim150_scaffold_2659_2
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2137..3324
DNA (1188bp) protein (396aa)
elongation factor Tu n=1 Tax=Segetibacter koreensis RepID=UPI000378845C
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
translation elongation factor Tu; K02358 elongation factor Tu
scnpilot_solids1_trim150_scaffold_2659_trna_5
unknown

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3496..3566
DNA (71bp)
transferRNA Trp
scnpilot_solids1_trim150_scaffold_2659_3
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3589..3783
DNA (195bp) protein (65aa)
Protein translocase subunit SecE n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7E6_NIAKG
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
Preprotein translocase subunit SecE; K03073 preprotein translocase subunit SecE
scnpilot_solids1_trim150_scaffold_2659_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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3786..4403
DNA (618bp) protein (206aa)
transcription antitermination protein NusG n=1 Tax=Segetibacter koreensis RepID=UPI00037098FC
transcription antitermination protein nusG; K02601 transcriptional antiterminator NusG
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids1_trim150_scaffold_2659_5
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(4501..5067)
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000373F4FC
Uncharacterized protein {ECO:0000313|EMBL:GAO42069.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2659_6
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(5072..6400)
DNA (1329bp) protein (443aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003644115
Uncharacterized protein {ECO:0000313|EMBL:KIC91174.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2659_7
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(6363..7103)
DNA (741bp) protein (247aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274, ECO:0000256|SAAS:SAAS00088448};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
putative Baf family transcriptional acitvator; K03525 type III pantothenate kinase [EC:2.7.1.33]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003668932
scnpilot_solids1_trim150_scaffold_2659_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(7265..7888)
DNA (624bp) protein (208aa)
Peptidase S16 lon domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGD2_NIAKG
peptidase S16 lon domain-containing protein; K07157
Peptidase S16 lon domain protein {ECO:0000313|EMBL:AEW02771.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_2659_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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8182..9585
DNA (1404bp) protein (468aa)
GTP-binding protein TypA n=1 Tax=Niabella soli DSM 19437 RepID=H1NQT1_9SPHI
GTP-binding protein TypA; K06207 GTP-binding protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying 14 items

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