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scnpilot_solids1_trim150_scaffold_2737

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2737_1
unknown

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comp(149..439)
DNA (291bp) protein (97aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2737_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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659..1279
DNA (621bp) protein (207aa)
Polysaccharide deacetylase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJV6_NIAKG
polysaccharide deacetylase
Polysaccharide deacetylase {ECO:0000313|EMBL:AEW01854.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_2737_3
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1388..2272)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJ12_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:GAO41654.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2737_4
Capnocytophaga cynodegmi, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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2376..3140
DNA (765bp) protein (255aa)
Hydrolase, TatD family {ECO:0000313|EMBL:CEN42126.1}; EC=3.1.21.- {ECO:0000313|EMBL:CEN42126.1};; TaxID=28189 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga cynodegmi.;"
TatD family hydrolase; K03424 TatD DNase family protein [EC:3.1.21.-]
TatD family hydrolase n=1 Tax=Capnocytophaga cynodegmi RepID=UPI000361DFAC
scnpilot_solids1_trim150_scaffold_2737_5
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3218..4969
DNA (1752bp) protein (584aa)
amino acid permease n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B7302D
Uncharacterized protein {ECO:0000313|EMBL:ETZ19573.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
amino acid permease
scnpilot_solids1_trim150_scaffold_2737_6
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(4985..5791)
DNA (807bp) protein (269aa)
membrane protein n=1 Tax=Segetibacter koreensis RepID=UPI00037BB1FA
membrane protease subunit, stomatin/prohibitin
Membrane protease subunit, stomatin/prohibitin {ECO:0000313|EMBL:AFD05895.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
scnpilot_solids1_trim150_scaffold_2737_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(5825..7138)
DNA (1314bp) protein (438aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003802816
Nodulation efficiency protein NfeD; K07403 membrane-bound serine protease (ClpP class)
Nodulation efficiency protein NfeD {ECO:0000313|EMBL:AEW02554.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_2737_8
unknown

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comp(7114..7263)
DNA (150bp) protein (50aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2737_9
unknown

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7564..7728
DNA (165bp) protein (55aa)

This feature has no annotations

Displaying 9 items

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