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scnpilot_solids1_trim150_scaffold_2763

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2763_1
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(11..622)
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Myroides injenensis RepID=UPI000288A1B1
Uncharacterized protein {ECO:0000313|EMBL:KIA99210.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2763_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(809..1768)
DNA (960bp) protein (320aa)
L-threonine 3-dehydrogenase {ECO:0000313|EMBL:AEW00745.1}; EC=1.1.1.103 {ECO:0000313|EMBL:AEW00745.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
L-threonine 3-dehydrogenase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJJ8_NIAKG
L-threonine 3-dehydrogenase
scnpilot_solids1_trim150_scaffold_2763_3
Imtechella halotolerans, Imtechella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(1816..2184)
DNA (369bp) protein (123aa)
membrane protein n=1 Tax=Bacteroides propionicifaciens RepID=UPI000377867D
Uncharacterized protein {ECO:0000313|EMBL:EID74545.1}; TaxID=946077 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Imtechella.;" source="Imtechella halotolerans K1.;"
hypothetical protein; K09922 hypothetical protein
scnpilot_solids1_trim150_scaffold_2763_4
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2198..2848)
DNA (651bp) protein (217aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708};; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037F5CE3
antimicrobial peptide ABC transporter ATPase
scnpilot_solids1_trim150_scaffold_2763_5
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3050..3274
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THA4_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAO41299.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
scnpilot_solids1_trim150_scaffold_2763_6
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(3354..4178)
DNA (825bp) protein (275aa)
enoyl-ACP reductase (NADH); K00208 enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9]
Enoyl-[acyl-carrier-protein] reductase [NADH] {ECO:0000256|PIRNR:PIRNR000094}; EC=1.3.1.9 {ECO:0000256|PIRNR:PIRNR000094};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Enoyl-[acyl-carrier-protein] reductase [NADH] n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PQ55_CHIPD
scnpilot_solids1_trim150_scaffold_2763_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4229..5878)
DNA (1650bp) protein (550aa)
DNA repair protein RecN n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THA6_NIAKG
DNA replication and repair protein RecN; K03631 DNA repair protein RecN (Recombination protein N)
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_2763_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(5983..6951)
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000367028E rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEW02042.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_2763_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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comp(6956..7558)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NSD0_9SPHI
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids1_trim150_scaffold_2763_trna_2
unknown

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comp(8146..8236)
DNA (91bp)
transferRNA Ser
scnpilot_solids1_trim150_scaffold_2763_trna_1
unknown

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8423..8497
DNA (75bp)
transferRNA Pro
scnpilot_solids1_trim150_scaffold_2763_10
Joostella marina, Joostella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

8795..9418
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003752E24
Site-specific recombinase XerD {ECO:0000313|EMBL:EIJ39913.1}; TaxID=926559 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Joostella.;" source="Joostella marina DSM 19592.;"
transposase
Displaying 12 items

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