ggKbase home page

scnpilot_solids1_trim150_scaffold_2955

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2955_1
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1..402
DNA (402bp) protein (134aa)
TonB-dependent receptor n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XZK6_PEDHD
Putative TonB-dependent receptor {ECO:0000313|EMBL:GAO44670.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein
scnpilot_solids1_trim150_scaffold_2955_2
unknown

Not on your lists

779..961
DNA (183bp) protein (61aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2955_3
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

978..1469
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NKS5_9SPHI
Signal peptide protein {ECO:0000313|EMBL:AHF14595.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2955_4
Salinisphaera shabanensis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1530..2723
DNA (1194bp) protein (398aa)
Putative uncharacterized protein id=1947427 bin=GWD2_Deltaproteobacteria_55_8 species=Salinisphaera shabanensis genus=Salinisphaera taxon_order=Salinisphaerales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Outer membrane channel OprB family protein {ECO:0000313|EMBL:ERJ19194.1}; TaxID=1033802 species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerales; Salinisphaeraceae; Salinisphaera.;" source="Salinisphaera shabanensis E1L3A.;"
carbohydrate-selective porin OprB; K07267 porin
scnpilot_solids1_trim150_scaffold_2955_5
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

2798..3277
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JUZ6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ELR72048.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
DoxX family protein
scnpilot_solids1_trim150_scaffold_2955_6
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3347..3982
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI00037A3225
ABC transporter ATP-binding protein
Tax=GWF2_Bacteroidetes_33_38_curated
scnpilot_solids1_trim150_scaffold_2955_7
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3979..4782
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI0003698D72 rbh
ABC transporter membrane protein; K02069 putative ABC transport system permease protein
Tax=GWF2_Bacteroidetes_38_335_curated
scnpilot_solids1_trim150_scaffold_2955_8
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5083..5847)
DNA (765bp) protein (255aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y9S8_9SPHI
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:EHQ31111.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
peroxiredoxin
scnpilot_solids1_trim150_scaffold_2955_9
unknown

Not on your lists

comp(6049..7287)
DNA (1239bp) protein (413aa)

This feature has no annotations

Displaying 9 items

View Taxonomy