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scnpilot_solids1_trim150_scaffold_4341

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_4341_1
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3..1679)
DNA (1677bp) protein (559aa)
hypothetical protein; K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12]
Divergent AAA domain protein n=1 Tax=Prevotella sp. CAG:873 RepID=R7J0W5_9BACT rbh
Divergent AAA domain protein {ECO:0000313|EMBL:CDE56507.1}; TaxID=1262936 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
scnpilot_solids1_trim150_scaffold_4341_2
Rhodonellum psychrophilum, Rhodonellum, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(1698..2648)
DNA (951bp) protein (317aa)
type I restriction system adenine methylase (hsdM) (EC:2.1.1.72)
Uncharacterized protein n=1 Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5BZN7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ERM83029.1}; TaxID=1123057 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Rhodonellum.;" source="Rhodonellum psychrophilum GCM71 = DSM 17998.;"
scnpilot_solids1_trim150_scaffold_4341_3
Rhodonellum psychrophilum, Rhodonellum, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(2720..3037)
DNA (318bp) protein (106aa)
type I restriction system adenine methylase (hsdM) (EC:2.1.1.72)
Uncharacterized protein n=1 Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5BZN7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ERM83029.1}; TaxID=1123057 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Rhodonellum.;" source="Rhodonellum psychrophilum GCM71 = DSM 17998.;"
scnpilot_solids1_trim150_scaffold_4341_4
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(3043..3600)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5BR14_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KGO80777.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
Restriction endonuclease S subunits
scnpilot_solids1_trim150_scaffold_4341_5
unknown

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4580..4963
DNA (384bp) protein (128aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_4341_6
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated, Bacteroidetes, Bacteria

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5166..5459
DNA (294bp) protein (98aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035F9E05
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
scnpilot_solids1_trim150_scaffold_4341_7
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated, Bacteroidetes, Bacteria

Not on your lists

5456..5947
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000369E8E3
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
scnpilot_solids1_trim150_scaffold_4341_8
unknown

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comp(6041..6199)
DNA (159bp) protein (53aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_4341_9
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(6500..7891)
DNA (1392bp) protein (464aa)
aldehyde dehydrogenase; K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
Aldehyde dehydrogenase n=1 Tax=Microcystis aeruginosa PCC 9807 RepID=I4H308_MICAE
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
scnpilot_solids1_trim150_scaffold_4341_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8260..8742
DNA (483bp) protein (161aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFC8_NIAKG
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEV97338.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_4341_11
unknown

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8723..10084
DNA (1362bp) protein (454aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_4341_12
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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10108..11349
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFD0_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV97340.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_4341_13
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11393..11956
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L502_HALH1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE48723.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
Displaying 13 items

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