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scnpilot_solids1_trim150_scaffold_217

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_217_1
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(236..919)
DNA (684bp) protein (228aa)
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KU09_SOLCM
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain {ECO:0000313|EMBL:AFD06989.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
scnpilot_solids1_trim150_scaffold_217_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(901..1662)
DNA (762bp) protein (254aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Putative signal transduction histidine kinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK18_NIAKG
putative signal transduction histidine kinase
scnpilot_solids1_trim150_scaffold_217_3
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1623..2273)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NKB7_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:GAO42657.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_217_4
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2273..2623)
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000370572A
Uncharacterized protein {ECO:0000313|EMBL:AHF18113.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
scnpilot_solids1_trim150_scaffold_217_5
unknown

Not on your lists

comp(2726..2890)
DNA (165bp) protein (55aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_217_6
unknown

Not on your lists

3439..3735
DNA (297bp) protein (99aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_217_7
unknown

Not on your lists

3742..4116
DNA (375bp) protein (125aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_217_8
unknown

Not on your lists

4402..4845
DNA (444bp) protein (148aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_217_9
unknown

Not on your lists

4936..5262
DNA (327bp) protein (109aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_217_10
unknown

Not on your lists

5535..5747
DNA (213bp) protein (71aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_217_11
unknown

Not on your lists

comp(5805..5993)
DNA (189bp) protein (63aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_217_12
unknown

Not on your lists

comp(6415..6615)
DNA (201bp) protein (67aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_217_13
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

7298..8161
DNA (864bp) protein (288aa)
N-6 DNA methylase; K03427 type I restriction enzyme M protein [EC:2.1.1.72]
Putative type I restriction enzymeP M protein n=1 Tax=Cecembia lonarensis LW9 RepID=K1LCH8_9BACT
Tax=BJP_IG2103_Bacteroidetes_40_10
scnpilot_solids1_trim150_scaffold_217_14
unknown

Not on your lists

8106..8315
DNA (210bp) protein (70aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_217_15
unknown

Not on your lists

8457..9125
DNA (669bp) protein (223aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_217_16
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(9637..12618)
DNA (2982bp) protein (994aa)
type III restriction protein res subunit; K01153 type I restriction enzyme, R subunit [EC:3.1.21.3]
Restriction endonuclease, type I, EcoRI, R subunit/Type III id=2098044 bin=GWB2_Ignavibacteria_35_12 species=Thiothrix nivea genus=Thiothrix taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
scnpilot_solids1_trim150_scaffold_217_17
Zunongwangia profunda, Zunongwangia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12661..13257)
DNA (597bp) protein (199aa)
PilT-like protein n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BER2_ZUNPS
hypothetical protein
PilT-like protein {ECO:0000313|EMBL:ADF50791.1}; TaxID=655815 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zunongwangia.;" source="Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87).;"
scnpilot_solids1_trim150_scaffold_217_18
Cecembia lonarensis, Cecembia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(13261..13587)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Cecembia lonarensis LW9 RepID=K1LWH4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKB48524.1}; TaxID=1225176 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cecembia.;" source="Cecembia lonarensis LW9.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_217_19
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13666..14514)
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KL13_SOLCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFD08830.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
scnpilot_solids1_trim150_scaffold_217_20
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(14520..15812)
DNA (1293bp) protein (431aa)
hypothetical protein; K01154 type I restriction enzyme, S subunit [EC:3.1.21.3] rbh
Type I restriction-modification system, specificity subunit S {ECO:0000313|EMBL:AKB52957.1}; EC=3.1.21.3 {ECO:0000313|EMBL:AKB52957.1};; TaxID=1434109 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri str. Wiesmoor.;"
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46DQ9_METBF rbh
scnpilot_solids1_trim150_scaffold_217_21
unknown

Not on your lists

comp(15817..15990)
DNA (174bp) protein (58aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_217_22
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(15996..17705)
DNA (1710bp) protein (570aa)
n-6 DNA methylase; K03427 type I restriction enzyme M protein [EC:2.1.1.72]
Putative uncharacterized protein id=4791465 bin=GWA2_Ignavibacteria-rel_35_8 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria rbh
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
scnpilot_solids1_trim150_scaffold_217_23
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17938..18582)
DNA (645bp) protein (215aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC20072.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
SEC-C motif domain protein
SEC-C motif domain protein id=3531847 bin=GWA1_Deltaproteobacteria_52_35 species=Leptolyngbya sp. PCC 7375 genus=Leptolyngbya taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
scnpilot_solids1_trim150_scaffold_217_24
Psychroflexus torquis, Psychroflexus, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18575..19525)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Psychroflexus torquis (strain ATCC 700755 / ACAM 623) RepID=K4INZ4_PSYTT rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFU67265.1}; TaxID=313595 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Psychroflexus.;" source="Psychroflexus torquis (strain ATCC 700755 / ACAM 623).;"
scnpilot_solids1_trim150_scaffold_217_25
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19509..20552)
DNA (1044bp) protein (348aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I9B6N9_BACFG
Uncharacterized protein {ECO:0000313|EMBL:KFC20073.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
patatin
scnpilot_solids1_trim150_scaffold_217_26
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20701..20877)
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Bacteroides salyersiae CL02T12C01 RepID=I9HRJ7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:ETZ24053.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_217_27
unknown

Not on your lists

comp(20852..20947)
DNA (96bp) protein (32aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_217_28
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21206..22315
DNA (1110bp) protein (370aa)
DNA-binding helix-turn-helix protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FW34_9SPHI rbh
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEI92814.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_217_29
Thermocrinis albus, Thermocrinis, Aquificales, Aquificae, Aquificae, Bacteria

Not on your lists

comp(22321..22728)
DNA (408bp) protein (136aa)
Nucleic acid binding OB-fold tRNA/helicase-type n=1 Tax=Thermocrinis albus (strain DSM 14484 / JCM 11386 / HI 11/12) RepID=D3SLZ7_THEAH
OB-fold tRNA/helicase-type nucleic acid binding protein
Nucleic acid binding OB-fold tRNA/helicase-type {ECO:0000313|EMBL:ADC89777.1}; TaxID=638303 species="Bacteria; Aquificae; Aquificales; Aquificaceae; Thermocrinis.;" source="Thermocrinis albus (strain DSM 14484 / JCM 11386 / HI 11/12).;"
scnpilot_solids1_trim150_scaffold_217_30
unknown

Not on your lists

comp(22715..22957)
DNA (243bp) protein (81aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036E233C
Displaying items 1-30 of 54 in total

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