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scnpilot_solids1_trim150_scaffold_251

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_251_1
unknown

Not on your lists

comp(3..116)
DNA (114bp) protein (38aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_251_2
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

663..1781
DNA (1119bp) protein (373aa)
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; EC=6.3.4.18 {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; 5-(carboxyamino)imidazole ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavih
5-(carboxyamino)imidazole ribonucleotide synthase; K01589 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
5-(Carboxyamino)imidazole ribonucleotide synthase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPS3_NIAKG
scnpilot_solids1_trim150_scaffold_251_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1858..2928
DNA (1071bp) protein (357aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPS4_NIAKG
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:AEV98907.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_251_4
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2932..5994
DNA (3063bp) protein (1021aa)
Acriflavin resistance protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPS5_NIAKG
Acriflavin resistance protein {ECO:0000313|EMBL:KIC89941.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
acriflavin resistance protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
scnpilot_solids1_trim150_scaffold_251_5
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5981..7297
DNA (1317bp) protein (439aa)
Putative RND-type efflux pump outer membrane protein {ECO:0000313|EMBL:GAO44455.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
Outer membrane efflux protein id=3185788 bin=GWF2_Bacteroidetes_33_38 species=Emticicia oligotrophica genus=Emticicia taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
outer membrane efflux protein
scnpilot_solids1_trim150_scaffold_251_6
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7334..7837
DNA (504bp) protein (168aa)
phosphoribosylaminoimidazole carboxylase catalytic subunit (EC:4.1.1.21); K01588 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XW26_PEDHD
scnpilot_solids1_trim150_scaffold_251_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7848..9449)
DNA (1602bp) protein (534aa)
Putative cysteine ligase BshC {ECO:0000256|HAMAP-Rule:MF_01867, ECO:0000256|SAAS:SAAS00275526}; EC=6.-.-.- {ECO:0000256|HAMAP-Rule:MF_01867, ECO:0000256|SAAS:SAAS00275528};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
UPF0747 protein Niako_2572 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPS9_NIAKG
hypothetical protein
scnpilot_solids1_trim150_scaffold_251_8
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9577..10884)
DNA (1308bp) protein (436aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=929713 species="Bacteria; Bac
30S ribosomal protein S12; K14441 ribosomal protein S12 methylthiotransferase [EC:2.-.-.-]
ribosomal protein S12 methylthiotransferase n=1 Tax=Segetibacter koreensis RepID=UPI000382110D
scnpilot_solids1_trim150_scaffold_251_9
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11022..12005)
DNA (984bp) protein (328aa)
Signal recognition particle receptor FtsY n=1 Tax=Niabella soli DSM 19437 RepID=H1NNL2_9SPHI
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
signal recognition particle-docking protein FtsY; K03110 fused signal recognition particle receptor
scnpilot_solids1_trim150_scaffold_251_10
unknown

Not on your lists

comp(12091..12258)
DNA (168bp) protein (56aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_251_11
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(12279..12461)
DNA (183bp) protein (61aa)
50S ribosomal protein L33 n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GR68_9SPHI
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
50S ribosomal protein L33
scnpilot_solids1_trim150_scaffold_251_12
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(12483..12719)
DNA (237bp) protein (79aa)
50S ribosomal protein L28 n=1 Tax=Segetibacter koreensis RepID=UPI00037F8A11
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
50S ribosomal protein L28P; K02902 large subunit ribosomal protein L28
scnpilot_solids1_trim150_scaffold_251_13
unknown

Not on your lists

12844..12942
DNA (99bp) protein (33aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_251_14
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13060..13356
DNA (297bp) protein (99aa)
Thioredoxin n=1 Tax=Niabella soli DSM 19437 RepID=H1NMK9_9SPHI
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
thioredoxin; K03671 thioredoxin 1
scnpilot_solids1_trim150_scaffold_251_15
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

13367..13780
DNA (414bp) protein (138aa)
osmotically inducible protein OsmC n=1 Tax=Myroides injenensis RepID=UPI00028968C4
hypothetical protein; K07397 putative redox protein
Tax=CG_Bacteroid_02
scnpilot_solids1_trim150_scaffold_251_16
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13795..14778)
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TI62_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW00679.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_251_17
unknown

Not on your lists

14938..15054
DNA (117bp) protein (39aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_251_18
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15246..16112
DNA (867bp) protein (289aa)
GTPase Era n=1 Tax=Niabella aurantiaca RepID=UPI00035D1897
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
GTP-binding protein Era-like-protein; K03595 GTP-binding protein Era
scnpilot_solids1_trim150_scaffold_251_19
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16124..16714
DNA (591bp) protein (197aa)
Putative uncharacterized protein n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FTK1_9FLAO
SAM-dependent methlyltransferase {ECO:0000313|EMBL:KIC90205.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
thiopurine S-methyltransferase
scnpilot_solids1_trim150_scaffold_251_20
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16747..17739
DNA (993bp) protein (331aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
chorismate synthase; K01736 chorismate synthase [EC:4.2.3.5]
chorismate synthase n=1 Tax=Segetibacter koreensis RepID=UPI000374B539
scnpilot_solids1_trim150_scaffold_251_21
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17740..19494)
DNA (1755bp) protein (585aa)
multidrug ABC transporter n=1 Tax=Niabella aurantiaca RepID=UPI0003653FFA
Multidrug ABC transporter {ECO:0000313|EMBL:AHF16343.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
ABC transporter
scnpilot_solids1_trim150_scaffold_251_22
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19571..21319)
DNA (1749bp) protein (583aa)
Xenobiotic-transporting ATPase n=1 Tax=Niabella soli DSM 19437 RepID=H1NVA4_9SPHI
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AHF16342.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
ABC transporter
scnpilot_solids1_trim150_scaffold_251_23
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21434..23047)
DNA (1614bp) protein (538aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037E42C8
magnesium transporter; K06213 magnesium transporter
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_251_24
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23117..23863
DNA (747bp) protein (249aa)
membrane protein n=1 Tax=Niabella aurantiaca RepID=UPI000367B4FA
Membrane protein {ECO:0000313|EMBL:AHF14795.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein; K06890
scnpilot_solids1_trim150_scaffold_251_25
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23964..24692
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035CAB74
Uncharacterized protein {ECO:0000313|EMBL:KIC91631.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein; K09797 hypothetical protein
scnpilot_solids1_trim150_scaffold_251_26
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24751..26406)
DNA (1656bp) protein (552aa)
beta-N-acetylhexosaminidase; K12373 hexosaminidase [EC:3.2.1.52] rbh
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000378469D
Uncharacterized protein {ECO:0000313|EMBL:KIC93339.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
scnpilot_solids1_trim150_scaffold_251_27
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

26630..26989
DNA (360bp) protein (120aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X1D7_FLAB3
Uncharacterized protein {ECO:0000313|EMBL:KIF31310.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_251_28
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26990..27799)
DNA (810bp) protein (270aa)
5'-nucleotidase, lipoprotein e(P4) family n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y097_9SPHI
5'-nucleotidase, lipoprotein e(P4) family {ECO:0000313|EMBL:EHQ28146.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
5'-nucleotidase
scnpilot_solids1_trim150_scaffold_251_29
Bacteroides sp. CAG:754, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27886..28821
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:754 RepID=R6E8V6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA86692.1}; TaxID=1262750 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:754.;"
DnaJ-class molecular chaperone with C-terminal Zn finger domain rbh
scnpilot_solids1_trim150_scaffold_251_30
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

28823..29107
DNA (285bp) protein (95aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003603D94
Uncharacterized protein {ECO:0000313|EMBL:KEQ28825.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
hypothetical protein
Displaying items 1-30 of 56 in total

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