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scnpilot_solids1_trim150_scaffold_553

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_553_1
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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73..1482
DNA (1410bp) protein (470aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PIN2_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU58221.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids1_trim150_scaffold_553_2
unknown

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comp(1479..1958)
DNA (480bp) protein (160aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_553_3
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

2167..3147
DNA (981bp) protein (327aa)
hypothetical protein; K03800 lipoate-protein ligase A [EC:2.7.7.63]
Lipoate--protein ligase {ECO:0000256|SAAS:SAAS00026637}; EC=2.7.7.63 {ECO:0000256|SAAS:SAAS00026637};; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ETF3_AMOA5
scnpilot_solids1_trim150_scaffold_553_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3218..4699)
DNA (1482bp) protein (494aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003700F72 rbh
peptidase S41
Peptidase S41 {ECO:0000313|EMBL:AEW02545.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_553_5
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4707..5747)
DNA (1041bp) protein (347aa)
thiamine-phosphate kinase; K00946 thiamine-monophosphate kinase [EC:2.7.4.16]
Thiamine-monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128}; Short=TMP kinase {ECO:0000256|HAMAP-Rule:MF_02128};; Short=Thiamine-phosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128};; EC=2.7.4.16 {ECO:0000256|HAMAP-Rule:MF_02128};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
thiamine-monophosphate kinase n=1 Tax=Segetibacter koreensis RepID=UPI00036208A4
scnpilot_solids1_trim150_scaffold_553_6
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(5999..6778)
DNA (780bp) protein (260aa)
inositol-phosphate phosphatase; K01092 myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
Inositol-phosphate phosphatase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCK3_NIAKG
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids1_trim150_scaffold_553_7
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

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6960..8825
DNA (1866bp) protein (622aa)
Putative glycosyltransferase id=4128504 bin=GWF2_Bacteroidetes_38_335 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11 rbh
family 2 glycosyl transferase rbh
Tax=GWF2_Bacteroidetes_38_335_curated
scnpilot_solids1_trim150_scaffold_553_8
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8904..9512
DNA (609bp) protein (203aa)
Peptidase S54, rhomboid domain n=1 Tax=Niabella soli DSM 19437 RepID=H1NT10_9SPHI
Transmembrane rhomboid family protein {ECO:0000313|EMBL:AHF16096.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
rhomboid family protein
scnpilot_solids1_trim150_scaffold_553_9
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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9578..10507
DNA (930bp) protein (310aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000377492C
Uncharacterized protein {ECO:0000313|EMBL:KIC91197.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
rhomboid family protein
scnpilot_solids1_trim150_scaffold_553_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

10540..11658
DNA (1119bp) protein (373aa)
Endonuclease/exonuclease/phosphatase n=1 Tax=Niabella soli DSM 19437 RepID=H1NT12_9SPHI
endonuclease/exonuclease/phosphatase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids1_trim150_scaffold_553_11
Marivirga tractuosa, Marivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

11953..12189
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) RepID=E4TM79_MARTH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADR21355.1}; TaxID=643867 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Marivirga.;" source="Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB; 1408 / VKM B-1430 / H-43) (Microscilla tractuosa) (Flexibacter; tractuosus).;"
scnpilot_solids1_trim150_scaffold_553_12
Peptococcaceae bacterium SCADC1_2_3, Clostridiales, Clostridia, Firmicutes, Bacteria

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12189..12368
DNA (180bp) protein (60aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1487582 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium SCADC1_2_3.;"
vapC; virulence associated protein C; K07062
Probable ribonuclease VapC id=1958755 bin=GWD2_Nitrospirae-related_57_8 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
scnpilot_solids1_trim150_scaffold_553_13
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12858..13646)
DNA (789bp) protein (263aa)
carbon-nitrogen hydrolase n=1 Tax=Niabella aurantiaca RepID=UPI00035FDF4D
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; K08590 carbon-nitrogen hydrolase family protein
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase {ECO:0000313|EMBL:ACU58521.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids1_trim150_scaffold_553_14
unknown

Not on your lists

comp(13700..13861)
DNA (162bp) protein (54aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_553_15
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14102..16753)
DNA (2652bp) protein (884aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000377D728
Uncharacterized protein {ECO:0000313|EMBL:AEW02552.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_553_16
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(16792..17592)
DNA (801bp) protein (267aa)
short-chain dehydrogenase/reductase SDR (EC:1.1.1.100); K00034 glucose 1-dehydrogenase [EC:1.1.1.47] rbh
glucose-1-dehydrogenase n=1 Tax=Cytophagales str. B6 RepID=UPI0003B4FAB3 rbh
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
scnpilot_solids1_trim150_scaffold_553_17
Aquimarina atlantica, Aquimarina, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17674..18741)
DNA (1068bp) protein (356aa)
AMP-dependent synthetase and ligase; K01911 O-succinylbenzoic acid--CoA ligase [EC:6.2.1.26]
AMP-dependent synthetase and ligase n=1 Tax=Krokinobacter sp. (strain 4H-3-7-5) RepID=F4AY13_KROS4
O-succinylbenzoic acid--CoA ligase {ECO:0000313|EMBL:EZH75813.1}; TaxID=1317122 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aquimarina.;" source="Aquimarina atlantica.;"
scnpilot_solids1_trim150_scaffold_553_18
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18738..19775)
DNA (1038bp) protein (346aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI00036A4C5D
Mandelate racemase {ECO:0000313|EMBL:KJJ39126.1}; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Vitellibacter.;" source="Vitellibacter vladivostokensis.;"
mandelate racemase
scnpilot_solids1_trim150_scaffold_553_19
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19942..20955)
DNA (1014bp) protein (338aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037CDDE8
Uncharacterized protein {ECO:0000313|EMBL:GAO45621.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_553_20
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(21269..22303)
DNA (1035bp) protein (345aa)
Radical SAM domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB87_NIAKG
radical SAM protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids1_trim150_scaffold_553_21
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22370..23113)
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037C6061
Uncharacterized protein {ECO:0000313|EMBL:GAO42195.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_553_22
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23213..23815)
DNA (603bp) protein (201aa)
formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase; K11175 phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TF71_NIAKG
scnpilot_solids1_trim150_scaffold_553_23
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24080..25330
DNA (1251bp) protein (417aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037730E7
Putative cytochrome c {ECO:0000313|EMBL:GAO42193.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
quinol:cytochrome c oxidoreductase pentaheme cytochrome subunit
scnpilot_solids1_trim150_scaffold_553_24
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

25396..28698
DNA (3303bp) protein (1101aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003799C13
Fe-S-cluster-containing hydrogenase subunit
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids1_trim150_scaffold_553_25
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

28750..29310
DNA (561bp) protein (187aa)
quinol:cytochrome c oxidoreductase quinone-binding subunit 1; K00185 molybdopterin oxidoreductase, membrane subunit [EC:1.2.7.-]
Quinol:cytochrome c oxidoreductase quinone-binding subunit 1 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TF74_NIAKG
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying 25 items

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