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scnpilot_solids1_trim150_scaffold_585

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_585_1
GWA2_Ignavibacteriae_55_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

1..513
DNA (513bp) protein (171aa)
nicotinamidase (EC:3.5.1.19); K08281 nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000380BEF0
Tax=GWA2_Ignavibacteriae_55_25_curated
scnpilot_solids1_trim150_scaffold_585_2
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1096..2379
DNA (1284bp) protein (428aa)
MiaB-like tRNA modifying enzyme n=1 Tax=Niabella soli DSM 19437 RepID=H1NJ88_9SPHI
2-methylthioadenine synthetase {ECO:0000313|EMBL:AHF14141.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
MiaB-like tRNA modifying protein
scnpilot_solids1_trim150_scaffold_585_3
unknown

Not on your lists

comp(2406..3191)
DNA (786bp) protein (262aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_585_4
unknown

Not on your lists

3307..3444
DNA (138bp) protein (46aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_585_5
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3550..5187
DNA (1638bp) protein (546aa)
Amino acid/peptide transporter (Peptide:H symporter) n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KVM3_SOLCM
Amino acid transporter {ECO:0000313|EMBL:KIC92375.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
amino acid/peptide transporter (peptide:H symporter)
scnpilot_solids1_trim150_scaffold_585_6
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5230..6405
DNA (1176bp) protein (392aa)
Beta-lactamase n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XY17_PEDHD rbh
Beta-lactamase {ECO:0000313|EMBL:KIA95748.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
beta-lactamase rbh
scnpilot_solids1_trim150_scaffold_585_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6550..7833)
DNA (1284bp) protein (428aa)
L-threonine ammonia-lyase; K01754 threonine dehydratase [EC:4.3.1.19]
L-threonine dehydratase {ECO:0000256|RuleBase:RU362012}; EC=4.3.1.19 {ECO:0000256|RuleBase:RU362012};; Threonine deaminase {ECO:0000256|RuleBase:RU362012}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
L-threonine ammonia-lyase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK74_NIAKG
scnpilot_solids1_trim150_scaffold_585_8
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7833..8735)
DNA (903bp) protein (301aa)
Ketol-acid reductoisomerase {ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|SAAS:SAAS00051427};; TaxID=1355388 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica 502.;"
ketol-acid reductoisomerase; K00053 ketol-acid reductoisomerase [EC:1.1.1.86]
ketol-acid reductoisomerase n=1 Tax=Segetibacter koreensis RepID=UPI00037AF907
scnpilot_solids1_trim150_scaffold_585_9
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8764..9348)
DNA (585bp) protein (195aa)
acetolactate synthase small subunit; K01653 acetolactate synthase I/III small subunit [EC:2.2.1.6]
Acetolactate synthase small subunit n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CIY0_ELIME
Acetohydroxyacid synthase small subunit {ECO:0000313|EMBL:KIC95666.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
scnpilot_solids1_trim150_scaffold_585_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9370..11112)
DNA (1743bp) protein (581aa)
acetolactate synthase, large subunit; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Acetolactate synthase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK70_NIAKG
scnpilot_solids1_trim150_scaffold_585_11
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11131..12813)
DNA (1683bp) protein (561aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=1216967 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535.;"
dihydroxy-acid dehydratase; K01687 dihydroxy-acid dehydratase [EC:4.2.1.9]
Dihydroxy-acid dehydratase n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CJT4_ELIME
scnpilot_solids1_trim150_scaffold_585_12
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12806..13723)
DNA (918bp) protein (306aa)
branched-chain amino acid aminotransferase (EC:2.6.1.42); K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42] rbh
Branched-chain amino acid aminotransferase n=1 Tax=Weeksella virosa (strain ATCC 43766 / DSM 16922 / JCM 21250 / NBRC 16016 / NCTC 11634 / CL345/78) RepID=F0P2Q6_WEEVC rbh
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:KIC90321.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
scnpilot_solids1_trim150_scaffold_585_13
unknown

Not on your lists

comp(13807..13905)
DNA (99bp) protein (33aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_585_14
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14024..15136)
DNA (1113bp) protein (371aa)
3-isopropylmalate dehydrogenase; K00052 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
3-isopropylmalate dehydrogenase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK68_NIAKG
scnpilot_solids1_trim150_scaffold_585_15
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15090..16571)
DNA (1482bp) protein (494aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037BF36B
ABC transporter; K05776 molybdate transport system ATP-binding protein
ABC transporter related protein {ECO:0000313|EMBL:AEV97263.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_585_16
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16572..17171)
DNA (600bp) protein (200aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031, ECO:0000256|SAAS:SAAS00089872};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
3-isopropylmalate dehydratase small subunit; K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
3-isopropylmalate dehydratase small subunit n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GS61_9BACT
scnpilot_solids1_trim150_scaffold_585_17
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(17182..18600)
DNA (1419bp) protein (473aa)
isopropylmalate isomerase large subunit; K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
3-isopropylmalate dehydratase large subunit n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PC95_CHIPD
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids1_trim150_scaffold_585_18
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18613..19779)
DNA (1167bp) protein (389aa)
2-isopropylmalate synthase; K01649 2-isopropylmalate synthase [EC:2.3.3.13]
2-isopropylmalate synthase {ECO:0000313|EMBL:AEV96501.1}; EC=2.3.3.13 {ECO:0000313|EMBL:AEV96501.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
2-isopropylmalate synthase n=1 Tax=Segetibacter koreensis RepID=UPI0003777675
scnpilot_solids1_trim150_scaffold_585_19
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19923..21494
DNA (1572bp) protein (524aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035FF911
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV96500.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_585_20
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(21500..22714)
DNA (1215bp) protein (405aa)
Fibronectin type III domain-containing protein n=1 Tax=Flexibacter litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 / NCIMB 1366 / Sio-4) RepID=I4AJY8_FLELS
fibronectin type III domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids1_trim150_scaffold_585_21
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

23014..23847
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036059AB
glutamine cyclotransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids1_trim150_scaffold_585_22
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23943..24812
DNA (870bp) protein (290aa)
OmpA/MotB domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TN51_NIAKG
OmpA/MotB domain-containing protein; K02557 chemotaxis protein MotB
OmpA/MotB domain protein {ECO:0000313|EMBL:AEV97736.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_585_23
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24866..26059)
DNA (1194bp) protein (398aa)
aspartate transaminase; K00812 aspartate aminotransferase [EC:2.6.1.1]
Aspartate transaminase n=1 Tax=Niabella soli DSM 19437 RepID=H1NPM4_9SPHI
Aspartate aminotransferase {ECO:0000313|EMBL:AHF14971.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
scnpilot_solids1_trim150_scaffold_585_24
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26216..29224)
DNA (3009bp) protein (1003aa)
Protein translocase subunit secF n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGF6_NIAKG
Preprotein translocase subunit SecD/F {ECO:0000313|EMBL:GAO44307.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
protein translocase subunit secD; K12257 SecD/SecF fusion protein
scnpilot_solids1_trim150_scaffold_585_25
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29604..30098)
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037C9057
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFD06384.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
scnpilot_solids1_trim150_scaffold_585_26
R_Deltaproteobacteria_38_15, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30312..30758
DNA (447bp) protein (149aa)
hypothetical protein id=24483076 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Verrucomicrobia tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_38_15_curated
scnpilot_solids1_trim150_scaffold_585_27
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(31063..31590)
DNA (528bp) protein (176aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y5Y5_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ30407.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_585_28
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

31713..32696
DNA (984bp) protein (328aa)
PhoH family protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9N6_NIAKG
PhoH-like protein {ECO:0000313|EMBL:GAO43663.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
PhoH family protein; K06217 phosphate starvation-inducible protein PhoH and related proteins
scnpilot_solids1_trim150_scaffold_585_29
unknown

Not on your lists

32871..33455
DNA (585bp) protein (195aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_585_30
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

33459..33881
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000361F330
Uncharacterized protein {ECO:0000313|EMBL:GAO43662.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
Displaying items 1-30 of 33 in total

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