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scnpilot_solids1_trim150_scaffold_596

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_596_1
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

53..2524
DNA (2472bp) protein (824aa)
replication restart DNA helicase PriA; K04066 primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:3.6.4.-]
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000380C551
scnpilot_solids1_trim150_scaffold_596_2
unknown

Not on your lists

comp(2608..2748)
DNA (141bp) protein (47aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_596_trna_1
unknown

Not on your lists

comp(2878..2963)
DNA (86bp)
transferRNA Leu
scnpilot_solids1_trim150_scaffold_596_3
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3132..4454
DNA (1323bp) protein (441aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0N041_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AIM36114.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_596_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4574..5941
DNA (1368bp) protein (456aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036560A6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV97996.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_596_5
unknown

Not on your lists

6009..6335
DNA (327bp) protein (109aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_596_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6345..6566
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJJ4_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW00741.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_596_7
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6588..6866)
DNA (279bp) protein (93aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037551BA
Uncharacterized protein {ECO:0000313|EMBL:KIC93772.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_596_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6885..7982)
DNA (1098bp) protein (366aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037482C3
DNA replication and repair protein RecF; K03629 DNA replication and repair protein RecF
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_596_9
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8062..8757)
DNA (696bp) protein (232aa)
ABC transporter related n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XYE1_PEDHD rbh
ATP-binding protein {ECO:0000313|EMBL:ETZ19715.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
ABC transporter; K01990 ABC-2 type transport system ATP-binding protein rbh
scnpilot_solids1_trim150_scaffold_596_10
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8762..10237)
DNA (1476bp) protein (492aa)
Putative uncharacterized protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XYE2_PEDHD rbh
Uncharacterized protein {ECO:0000313|EMBL:KIA93142.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_596_11
unknown

Not on your lists

comp(10271..10696)
DNA (426bp) protein (142aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_596_12
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10907..13522
DNA (2616bp) protein (872aa)
molecular chaperone ClpB n=1 Tax=Segetibacter koreensis RepID=UPI00035EE016
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
ATP-dependent chaperone ClpB; K03695 ATP-dependent Clp protease ATP-binding subunit ClpB
scnpilot_solids1_trim150_scaffold_596_13
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(13581..14474)
DNA (894bp) protein (298aa)
phosphoribosylaminoimidazolesuccinocarboxamide synthase; K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Segetibacter koreensis RepID=UPI0003724440
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids1_trim150_scaffold_596_14
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14645..17410
DNA (2766bp) protein (922aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037BC436
Uncharacterized protein {ECO:0000313|EMBL:KIC94882.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
TonB-dependent receptor
scnpilot_solids1_trim150_scaffold_596_15
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17422..18666
DNA (1245bp) protein (415aa)
Uncharacterized protein {ECO:0000313|EMBL:KIC91935.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
scnpilot_solids1_trim150_scaffold_596_16
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18859..19539
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003827C2A
Uncharacterized protein {ECO:0000313|EMBL:KIC92880.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
scnpilot_solids1_trim150_scaffold_596_17
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19579..20679)
DNA (1101bp) protein (367aa)
Ribosome-binding ATPase YchF n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TKD1_NIAKG
GTP-binding protein YchF; K06942
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_596_18
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20892..22016)
DNA (1125bp) protein (375aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000372334A
glycoside hydrolase
Glycoside hydrolase, family 20, catalytic core {ECO:0000313|EMBL:ACU61406.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids1_trim150_scaffold_596_19
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22216..23163)
DNA (948bp) protein (316aa)
arginase/agmatinase/formiminoglutamase; K01476 arginase [EC:3.5.3.1]
arginase n=1 Tax=Segetibacter koreensis RepID=UPI000373B1D4
Arginase/agmatinase/formiminoglutamase {ECO:0000313|EMBL:ACU63697.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids1_trim150_scaffold_596_20
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23352..24170)
DNA (819bp) protein (273aa)
UspA domain-containing protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TH23_NIAKG
UspA domain-containing protein
UspA domain-containing protein {ECO:0000313|EMBL:AEW00634.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_596_21
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24517..28068
DNA (3552bp) protein (1184aa)
Chromosome partition protein Smc n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T6T4_NIAKG
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
condensin subunit Smc; K03529 chromosome segregation protein
scnpilot_solids1_trim150_scaffold_596_22
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

28093..28683
DNA (591bp) protein (197aa)
tRNA/rRNA methyltransferase SpoU; K00556 tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34]
tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PC85_CHIPD
tRNA/rRNA methyltransferase (SpoU) {ECO:0000313|EMBL:ACU59468.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids1_trim150_scaffold_596_23
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

28856..29530
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Methylocystis sp. (strain SC2) RepID=I4EB07_METSZ
Uncharacterized protein {ECO:0000313|EMBL:KGO09919.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_596_24
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29680..30957)
DNA (1278bp) protein (426aa)
Amidohydrolase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TRS9_NIAKG rbh
amidohydrolase rbh
Amidohydrolase {ECO:0000313|EMBL:AEW03264.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_596_25
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(31013..32632)
DNA (1620bp) protein (540aa)
Peptidase M28 n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C5B2_SPHS2 rbh
peptidase M28 rbh
Peptidase M28 {ECO:0000313|EMBL:ADZ78212.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
scnpilot_solids1_trim150_scaffold_596_26
unknown

Not on your lists

32925..33068
DNA (144bp) protein (48aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_596_27
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

33139..34758
DNA (1620bp) protein (540aa)
hypothetical protein n=1 Tax=Balneola vulgaris RepID=UPI00037AC9AC
Carboxypeptidase {ECO:0000313|EMBL:KIC91765.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
carboxypeptidase-like protein
scnpilot_solids1_trim150_scaffold_596_28
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

34820..36193
DNA (1374bp) protein (458aa)
L-proline dehydrogenase; K00318 proline dehydrogenase [EC:1.5.99.8]
L-proline dehydrogenase {ECO:0000313|EMBL:AEW00909.1}; EC=1.5.99.8 {ECO:0000313|EMBL:AEW00909.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
L-proline dehydrogenase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMC7_NIAKG
scnpilot_solids1_trim150_scaffold_596_29
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

36481..37188
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B69BE2
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ28588.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein
Displaying items 1-30 of 33 in total

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