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scnpilot_solids1_trim150_scaffold_612

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_612_1
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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1..345
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000366F5FA
Helix-turn-helix, AraC domain-containing protein
Helix-turn-helix, AraC domain-containing protein {ECO:0000313|EMBL:AFK02099.1}; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
scnpilot_solids1_trim150_scaffold_612_2
unknown

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435..746
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037E8872
scnpilot_solids1_trim150_scaffold_612_3
Porphyromonadaceae bacterium COT-184 OH4590, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1344..2420
DNA (1077bp) protein (359aa)
Putative autotransporter protein n=1 Tax=Formosa sp. AK20 RepID=M7N0B2_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KGN82035.1}; TaxID=1517682 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium COT-184 OH4590.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_612_4
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2719..5844
DNA (3126bp) protein (1042aa)
Signal transduction histidine kinase, LytS n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRK4_CHIPD rbh
signal transduction histidine kinase LytS rbh
Signal transduction histidine kinase, LytS {ECO:0000313|EMBL:ACU58897.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids1_trim150_scaffold_612_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5855..6598
DNA (744bp) protein (248aa)
Two component transcriptional regulator, LytTR family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDA4_NIAKG
LytTR family two component transcriptional regulator
Two component transcriptional regulator, LytTR family {ECO:0000313|EMBL:AEV99344.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_612_6
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6719..7255)
DNA (537bp) protein (179aa)
YceI family protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NSK7_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF16062.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_612_7
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7533..10259)
DNA (2727bp) protein (909aa)
AsmA family protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PC84_CHIPD
AsmA family protein
AsmA family protein {ECO:0000313|EMBL:ACU59467.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids1_trim150_scaffold_612_8
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10477..10929
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI00031FFA2B
Uncharacterized protein {ECO:0000313|EMBL:KIC94250.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
OsmC family protein; K07397 putative redox protein
scnpilot_solids1_trim150_scaffold_612_9
Paenibacillus sp. FSL H7-0737, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(10951..12135)
DNA (1185bp) protein (395aa)
MFS transporter n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B4284F rbh
MFS transporter permease {ECO:0000313|EMBL:AIQ24190.1}; TaxID=1536775 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL H7-0737.;"
arabinose efflux permease family protein rbh
scnpilot_solids1_trim150_scaffold_612_10
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12232..12711)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W8V9_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EFK35870.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_612_11
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12721..13290)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8ER35_RUNSL
Uncharacterized protein {ECO:0000313|EMBL:KEQ30435.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_612_12
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

13739..14539
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W078_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EFK36039.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_612_13
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14666..17026
DNA (2361bp) protein (787aa)
Peptidase S9 prolyl oligopeptidase active site domain protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NQA9_9SPHI
Peptidase S9 {ECO:0000313|EMBL:AHF15881.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
peptidase S9 prolyl oligopeptidase active site domain-containing protein
scnpilot_solids1_trim150_scaffold_612_14
unknown

Not on your lists

comp(17105..17587)
DNA (483bp) protein (161aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_612_15
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(17845..18345)
DNA (501bp) protein (167aa)
30S ribosomal protein S16 n=1 Tax=Niabella soli DSM 19437 RepID=H1NRU7_9SPHI
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
30S ribosomal protein S16; K02959 small subunit ribosomal protein S16
scnpilot_solids1_trim150_scaffold_612_16
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18516..19994
DNA (1479bp) protein (493aa)
UDP-3-O-(3-hydroxymyristoyl) N-acetylglucosamine deacetylase, 3-hydroxyacyl-(acyl-carrier-protein) dehydratase; K02372 3R-hydroxymyristoyl ACP dehydrase [EC:4.2.1.-]; K02535 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|SAAS:SAAS00064869}; EC=3.5.1.- {ECO:0000256|SAAS:SAAS00041386};; EC=4.2.1.59 {ECO:0000256|SAAS:SAAS00064862};; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase {ECO:0000256|SAAS:SAAS00041388}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003732E0F
scnpilot_solids1_trim150_scaffold_612_17
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

19987..20802
DNA (816bp) protein (272aa)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|SAAS:SAAS00064156}; EC=2.3.1.129 {ECO:0000256|SAAS:SAAS00001267};; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003701AE9
acyl-(acyl-carrier-protein)--UDP-N-acetylglucosa mineO-acyltransferase
scnpilot_solids1_trim150_scaffold_612_18
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20805..21422
DNA (618bp) protein (206aa)
ABC transporter related protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP61_NIAKG
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KIC92458.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
ABC transporter
scnpilot_solids1_trim150_scaffold_612_19
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

21494..22168
DNA (675bp) protein (225aa)
signal peptidase II; K03101 signal peptidase II [EC:3.4.23.36]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000379BCD2
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids1_trim150_scaffold_612_20
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

22240..23646
DNA (1407bp) protein (469aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036DAD90
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids1_trim150_scaffold_612_21
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23678..25912)
DNA (2235bp) protein (745aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI000371E60E
Uncharacterized protein {ECO:0000313|EMBL:GAO41662.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
PDK repeat-containing protein
scnpilot_solids1_trim150_scaffold_612_22
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26012..27160)
DNA (1149bp) protein (383aa)
hypothetical protein n=1 Tax=Lewinella persica RepID=UPI0003714E2B
Uncharacterized protein {ECO:0000313|EMBL:GAO41662.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
Displaying 22 items

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