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scnpilot_solids1_trim150_scaffold_754

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_754_1
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1..1647
DNA (1647bp) protein (549aa)
phenylalanyl-tRNA synthetase subunit beta; K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJS6_NIAKG
scnpilot_solids1_trim150_scaffold_754_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1640..1930
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJS7_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW01825.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_754_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1934..2218
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJS9_NIAKG
hypothetical protein; K09888 cell division protein ZapA
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_754_4
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2226..2915)
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B416B8
Uncharacterized protein {ECO:0000313|EMBL:ETZ19898.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_754_5
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


3009..4466
DNA (1458bp) protein (486aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
glycyl-tRNA synthetase; K01880 glycyl-tRNA synthetase [EC:6.1.1.14]
glycyl-tRNA synthetease n=1 Tax=Segetibacter koreensis RepID=UPI0003661282
scnpilot_solids1_trim150_scaffold_754_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4487..5236)
DNA (750bp) protein (250aa)
Ferredoxin--NAD(+) reductase {ECO:0000313|EMBL:AEW01877.1}; EC=1.18.1.3 {ECO:0000313|EMBL:AEW01877.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Ferredoxin--NAD(+) reductase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL36_NIAKG
ferredoxin--NAD(+) reductase
scnpilot_solids1_trim150_scaffold_754_7
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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5550..5747
DNA (198bp) protein (66aa)
30S ribosomal protein S21 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUF3_CHIPD
30S ribosomal protein S21; K02970 small subunit ribosomal protein S21
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids1_trim150_scaffold_754_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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5808..6701
DNA (894bp) protein (298aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000364BF1F
xerC; integrase; K03733 integrase/recombinase XerC
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids1_trim150_scaffold_754_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6825..7124
DNA (300bp) protein (100aa)
Sigma-54 modulation protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7E8_NIAKG
sigma-54 modulation protein; K05808 putative sigma-54 modulation protein
Sigma-54 modulation protein {ECO:0000313|EMBL:AEW01184.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_754_10
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7183..8196
DNA (1014bp) protein (338aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000379DF5D
Putative AraC family transcriptional regulator {ECO:0000313|EMBL:GAO45559.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
AraC family transcriptional regulator
scnpilot_solids1_trim150_scaffold_754_11
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8565..9446
DNA (882bp) protein (294aa)
ATP synthase F1 subunit gamma; K02115 F-type H+-transporting ATPase subunit gamma [EC:3.6.3.14]
ATP synthase gamma chain n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PV56_CHIPD
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids1_trim150_scaffold_754_12
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9461..10180
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036AFFB0
Segregation and condensation protein B {ECO:0000256|SAAS:SAAS00086417}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
chromosome segregation and condensation protein ScpB; K06024 segregation and condensation protein B
scnpilot_solids1_trim150_scaffold_754_13
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10184..11404
DNA (1221bp) protein (407aa)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
diaminopimelate decarboxylase; K01586 diaminopimelate decarboxylase [EC:4.1.1.20]
diaminopimelate decarboxylase n=1 Tax=Niabella aurantiaca RepID=UPI000381FB9B
scnpilot_solids1_trim150_scaffold_754_14
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11416..12669
DNA (1254bp) protein (418aa)
D-amino-acid dehydrogenase; K00285 D-amino-acid dehydrogenase [EC:1.4.99.1]
D-amino-acid dehydrogenase {ECO:0000313|EMBL:AEV98914.1}; EC=1.4.99.1 {ECO:0000313|EMBL:AEV98914.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
D-amino-acid dehydrogenase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPT1_NIAKG
scnpilot_solids1_trim150_scaffold_754_15
Hymenobacter sp. DG25B, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

12774..13367
DNA (594bp) protein (198aa)
riboflavin synthase subunit alpha (EC:2.5.1.9); K00793 riboflavin synthase [EC:2.5.1.9]
riboflavin synthase subunit alpha n=1 Tax=Segetibacter koreensis RepID=UPI00037F1178
Riboflavin synthase subunit alpha {ECO:0000313|EMBL:AIZ64007.1}; TaxID=1385664 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. DG25B.;"
scnpilot_solids1_trim150_scaffold_754_16
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13369..14931)
DNA (1563bp) protein (521aa)
Response regulator receiver protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP66_NIAKG
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:AEW03184.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_754_17
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15044..16273
DNA (1230bp) protein (410aa)
Metal dependent phosphohydrolase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP65_NIAKG
metal dependent phosphohydrolase; K06885
Metal dependent phosphohydrolase {ECO:0000313|EMBL:AEW03183.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_754_18
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16282..17322
DNA (1041bp) protein (347aa)
UDP-3-O-acylglucosamine N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00523}; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_00523};; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; K02536 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
UDP-3-O-acylglucosamine N-acyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP64_NIAKG
scnpilot_solids1_trim150_scaffold_754_19
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17634..18839
DNA (1206bp) protein (402aa)
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Clostridium bolteae 90B8 RepID=N9ZPN8_9CLOT rbh
L-carnitine dehydratase/bile acid-inducible protein F {ECO:0000313|EMBL:ENZ41825.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
L-carnitine dehydratase/bile acid-inducible protein F rbh
scnpilot_solids1_trim150_scaffold_754_20
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18826..19590
DNA (765bp) protein (255aa)
enoyl-CoA hydratase (EC:4.2.1.17)
Uncharacterized protein n=3 Tax=Clostridium RepID=N9XF82_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ49298.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
scnpilot_solids1_trim150_scaffold_754_21
Caldicellulosiruptor kronotskyensis, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

19600..20739
DNA (1140bp) protein (380aa)
Glycosyl hydrolase family 88 n=1 Tax=Caldicellulosiruptor kronotskyensis (strain DSM 18902 / VKM B-2412 / 2002) RepID=E4SCQ5_CALK2
glycosyl hydrolase family 88
Glycosyl hydrolase family 88 {ECO:0000313|EMBL:ADQ45038.1}; TaxID=632348 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicellulosiruptor.;" source="Caldicellulosiruptor kronotskyensis (strain DSM 18902 / VKM B-2412 /; 2002).;"
scnpilot_solids1_trim150_scaffold_754_22
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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20767..22053
DNA (1287bp) protein (429aa)
D-galactonate transporter n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q20XI3_RHOPB rbh
D-galactonate transporter; K13021 MFS transporter, ACS family, tartrate transporter rbh
D-galactonate transporter {ECO:0000313|EMBL:ABD90153.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
scnpilot_solids1_trim150_scaffold_754_23
Cyclobacteriaceae bacterium AK24, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

22243..22485
DNA (243bp) protein (81aa)
2-dehydro-3-deoxygluconate kinase {ECO:0000313|EMBL:EON79328.1}; EC=2.7.1.45 {ECO:0000313|EMBL:EON79328.1};; TaxID=1288963 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; unclassified Cyclobacteriaceae.;" source="Cyclobacteriaceae bacterium AK24.;"
PfkB domain-containing protein; K00874 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
2-dehydro-3-deoxygluconate kinase n=1 Tax=Cyclobacteriaceae bacterium AK24 RepID=R7ZZ53_9BACT
scnpilot_solids1_trim150_scaffold_754_24
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22502..23167
DNA (666bp) protein (222aa)
PfkB domain-containing protein; K00874 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
PfkB domain protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NSB9_9SPHI
2-dehydro-3-deoxygluconokinase {ECO:0000313|EMBL:AHF16661.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
Displaying 24 items

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