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scnpilot_solids1_trim150_scaffold_952

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_952_1
Sulfurimonas denitrificans, Sulfurimonas, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

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2..205
DNA (204bp) protein (68aa)
hypothetical protein; K02619 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
Putative para-aminobenzoate synthase component I n=1 Tax=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) RepID=Q30TG6_SULDN
Putative para-aminobenzoate synthase component I {ECO:0000313|EMBL:ABB43715.1}; TaxID=326298 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfurimonas.;" source="Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251); (Thiomicrospira denitrificans (strain ATCC 33889 / DSM 1251)).;"
scnpilot_solids1_trim150_scaffold_952_2
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(466..1374)
DNA (909bp) protein (303aa)
beta-lactamase; K01467 beta-lactamase [EC:3.5.2.6] rbh
Beta-lactamase n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EQN1_EMTOG rbh
Beta-lactamase {ECO:0000313|EMBL:AFK01984.1}; Flags: Precursor;; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
scnpilot_solids1_trim150_scaffold_952_3
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1524..1901
DNA (378bp) protein (126aa)
response regulator receiver n=1 Tax=Cytophagales str. B6 RepID=UPI0003B69817
Response regulator receiver protein {ECO:0000313|EMBL:EHQ29607.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
scnpilot_solids1_trim150_scaffold_952_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1933..3657)
DNA (1725bp) protein (575aa)
Pyruvate dehydrogenase (acetyl-transferring), 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring); K11381 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
Pyruvate dehydrogenase (Acetyl-transferring), 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) {ECO:0000313|EMBL:AEV96584.1}; EC=1.2.4.1 {ECO:0000313|EMBL:AEV96584.1};; EC=1.2.4.4 {ECO:0000313|EMBL:AEV96584.1};; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Pyruvate dehydrogenase (Acetyl-transferring), 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TLL5_NIAKG
scnpilot_solids1_trim150_scaffold_952_5
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4032..5135)
DNA (1104bp) protein (368aa)
Cellulase n=1 Tax=Niabella soli DSM 19437 RepID=H1NRM5_9SPHI
Peptidase M42 family protein {ECO:0000313|EMBL:GAO43415.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
cellulase
scnpilot_solids1_trim150_scaffold_952_6
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(5364..5801)
DNA (438bp) protein (146aa)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids1_trim150_scaffold_952_7
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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5964..6842
DNA (879bp) protein (293aa)
acyl transferase n=1 Tax=Mesoflavibacter zeaxanthinifaciens RepID=UPI000255AFA7
acyl-CoA synthetase
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II {ECO:0000313|EMBL:AFD05564.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
scnpilot_solids1_trim150_scaffold_952_8
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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6879..7544
DNA (666bp) protein (222aa)
peptide methionine sulfoxide reductase; K07304 peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037F7231
scnpilot_solids1_trim150_scaffold_952_9
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7593..8165
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQT4_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC89426.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_952_10
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(8266..9183)
DNA (918bp) protein (306aa)
Hexose kinase, 1-phosphofructokinase family n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0FR84_ECHVK
hexose kinase
Hexose kinase, 1-phosphofructokinase family {ECO:0000313|EMBL:AGA76454.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
scnpilot_solids1_trim150_scaffold_952_11
unknown

Not on your lists

comp(9312..9518)
DNA (207bp) protein (69aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_952_12
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9524..11176)
DNA (1653bp) protein (551aa)
SSS sodium solute transporter superfamily n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCP9_NIAKG rbh
Na+/galactose cotransporter {ECO:0000313|EMBL:KIA94410.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;"
SSS sodium solute transporter superfamily protein rbh
scnpilot_solids1_trim150_scaffold_952_13
RBG_16_Aminicenantes_63_16_curated, Aminicenantes, Bacteria

Not on your lists

11515..14085
DNA (2571bp) protein (857aa)
glycoside hydrolase; K15855 exo-1,4-beta-D-glucosaminidase [EC:3.2.1.165] rbh
Glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich id=8266218 bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CD_OP8_4m organism_group=OP8 (Aminicenantes) rbh
Tax=RBG_16_Aminicenantes_63_16_curated
scnpilot_solids1_trim150_scaffold_952_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

14112..15389
DNA (1278bp) protein (426aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036847D9
major facilitator superfamily protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
scnpilot_solids1_trim150_scaffold_952_15
RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated, Bacteroidetes, Bacteria

Not on your lists

15606..16265
DNA (660bp) protein (220aa)
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated
scnpilot_solids1_trim150_scaffold_952_16
unknown

Not on your lists

16225..17373
DNA (1149bp) protein (383aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI00037DD1B4
scnpilot_solids1_trim150_scaffold_952_17
candidate division TM7 genomosp. GTL1, Candidatus Saccharibacteria, Bacteria

Not on your lists

17386..18273
DNA (888bp) protein (296aa)
UbiA prenyltransferase n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KSJ0_9BACT rbh
UbiA prenyltransferase {ECO:0000313|EMBL:EDK72595.1}; TaxID=443342 species="Bacteria; Candidatus Saccharibacteria.;" source="candidate division TM7 genomosp. GTL1.;"
UbiA prenyltransferase
scnpilot_solids1_trim150_scaffold_952_18
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18270..18869
DNA (600bp) protein (200aa)
HAD-superfamily subfamily IB hydrolase, TIGR01490 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PE09_CHIPD
HAD-superfamily hydrolase
HAD-superfamily subfamily IB hydrolase, TIGR01490 {ECO:0000313|EMBL:ACU61509.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids1_trim150_scaffold_952_19
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18866..19396)
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035C1232
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV97585.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_952_20
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19576..20310)
DNA (735bp) protein (245aa)
LmbE family protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TH31_NIAKG rbh
LmbE family protein rbh
LmbE family protein {ECO:0000313|EMBL:AEW00642.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_952_21
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20376..20987)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQZ2_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:GAO44475.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_952_22
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(21091..23445)
DNA (2355bp) protein (785aa)
Cytochrome c assembly protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQZ1_NIAKG
cytochrome c assembly protein; K02198 cytochrome c-type biogenesis protein CcmF
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids1_trim150_scaffold_952_23
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(23455..23859)
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003657DFA
hypothetical protein; K02197 cytochrome c-type biogenesis protein CcmE
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids1_trim150_scaffold_952_24
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24219..24635
DNA (417bp) protein (139aa)
Peptidase S41 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRR0_CHIPD
peptidase S41
Peptidase S41 {ECO:0000313|EMBL:ACU58953.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids1_trim150_scaffold_952_25
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24604..25716
DNA (1113bp) protein (371aa)
Peptidase S41 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRR0_CHIPD rbh
peptidase S41 rbh
Peptidase S41 {ECO:0000313|EMBL:ACU58953.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids1_trim150_scaffold_952_26
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26000..26452)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TEE6_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV98356.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_952_27
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(26497..27408)
DNA (912bp) protein (304aa)
metallophosphoesterase (EC:3.6.1.-) rbh
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000371C438 rbh
Tax=BJP_IG2103_Bacteroidetes_41_9
scnpilot_solids1_trim150_scaffold_952_28
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27614..28840)
DNA (1227bp) protein (409aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035C3A8B rbh
hypothetical protein rbh
Tax=GWC2_Bacteroidetes_46_850_curated
scnpilot_solids1_trim150_scaffold_952_29
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28857..30053)
DNA (1197bp) protein (399aa)
Uncharacterized protein id=1731244 bin=GWD2_Bacteroidales_45_23 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
Outer membrane receptor proteins, mostly Fe transport
Tax=GWC2_Bacteroidetes_46_850_curated
Displaying 29 items

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