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scnpilot_solids1_trim150_scaffold_1120

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1120_1
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(52..450)
DNA (399bp) protein (133aa)
TonB-dependent receptor n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GXH2_9SPHI
TonB-dependent receptor {ECO:0000313|EMBL:EOR96466.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
TonB-dependent receptor plug
scnpilot_solids1_trim150_scaffold_1120_2
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(422..3103)
DNA (2682bp) protein (894aa)
TonB-dependent receptor plug n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GDC9_9BACT rbh
TonB-dependent receptor {ECO:0000313|EMBL:KIC94771.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
TonB-dependent receptor plug rbh
scnpilot_solids1_trim150_scaffold_1120_3
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3494..5647)
DNA (2154bp) protein (718aa)
Transporter, CPA2 family n=1 Tax=Niabella soli DSM 19437 RepID=H1NT91_9SPHI
sodium/hydrogen exchanger
Tax=GWA2_Bacteroidetes_31_9_curated
scnpilot_solids1_trim150_scaffold_1120_4
Anditalea andensis, Anditalea, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

6003..6467
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KQ57_SOLCM
Uncharacterized protein {ECO:0000313|EMBL:KEO71909.1}; TaxID=1048983 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Anditalea.;" source="Anditalea andensis.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1120_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6592..7020
DNA (429bp) protein (143aa)
GtrA family protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGL8_NIAKG
GtrA family protein
GtrA family protein {ECO:0000313|EMBL:AEV98460.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_1120_6
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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7103..9022
DNA (1920bp) protein (640aa)
molecular chaperone DnaK n=1 Tax=Segetibacter koreensis RepID=UPI000364C4CA
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
chaperone protein dnaK; K04043 molecular chaperone DnaK
scnpilot_solids1_trim150_scaffold_1120_7
unknown

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9178..9627
DNA (450bp) protein (150aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1120_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9834..12419
DNA (2586bp) protein (862aa)
4-alpha-glucanotransferase; K00705 4-alpha-glucanotransferase [EC:2.4.1.25]
4-alpha-glucanotransferase {ECO:0000313|EMBL:AEV98902.1}; EC=2.4.1.25 {ECO:0000313|EMBL:AEV98902.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
4-alpha-glucanotransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPR9_NIAKG
scnpilot_solids1_trim150_scaffold_1120_9
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12428..13456
DNA (1029bp) protein (343aa)
Muconate cycloisomerase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPR8_NIAKG
L-alanine-DL-glutamate epimerase {ECO:0000313|EMBL:KIC93818.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
Muconate cycloisomerase
scnpilot_solids1_trim150_scaffold_1120_10
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13470..15119)
DNA (1650bp) protein (550aa)
BatB protein id=3615635 bin=GWF2_Bacteroidetes_43_11 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
BatB/BatC protein; K07114 uncharacterized protein
Tax=GWF2_Bacteroidetes_43_11_curated
scnpilot_solids1_trim150_scaffold_1120_11
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15211..16899)
DNA (1689bp) protein (563aa)
xenobiotic-transporting ATPase; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000365BE23
Antibiotic ABC transporter ATP-binding protein {ECO:0000313|EMBL:KIC96115.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
scnpilot_solids1_trim150_scaffold_1120_12
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

16966..17346
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003700443
ribosome-binding factor A; K02834 ribosome-binding factor A
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids1_trim150_scaffold_1120_13
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17363..18583
DNA (1221bp) protein (407aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036576D3
Uncharacterized protein {ECO:0000313|EMBL:KIC89148.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein; K09808 lipoprotein-releasing system permease protein
scnpilot_solids1_trim150_scaffold_1120_14
Thermoplasma acidophilum, Thermoplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

18951..20309
DNA (1359bp) protein (453aa)
4-HYDROXYBENZOATE TRANSPORTER related protein n=1 Tax=Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165) RepID=Q9HID5_THEAC rbh
4-hydroxybenzoate transporter rbh
4-HYDROXYBENZOATE TRANSPORTER related protein {ECO:0000313|EMBL:CAC12525.1}; TaxID=273075 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Thermoplasmataceae; Thermoplasma.;" source="Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 /; NBRC 15155 / AMRC-C165).;"
scnpilot_solids1_trim150_scaffold_1120_15
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20436..24011)
DNA (3576bp) protein (1192aa)
copper transporter n=1 Tax=Segetibacter koreensis RepID=UPI00035CB140
Copper transporter {ECO:0000313|EMBL:KIC96044.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
acriflavin resistance protein
scnpilot_solids1_trim150_scaffold_1120_16
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24062..25264)
DNA (1203bp) protein (401aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035D50DD
Putative RND-type efflux pump membrane fusion protein {ECO:0000313|EMBL:GAO41854.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
RND family efflux transporter MFP subunit
scnpilot_solids1_trim150_scaffold_1120_17
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(25289..26695)
DNA (1407bp) protein (469aa)
Outer membrane efflux protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNV4_NIAKG
outer membrane efflux protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids1_trim150_scaffold_1120_18
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26692..27321)
DNA (630bp) protein (210aa)
Transcriptional regulator, TetR family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNV5_NIAKG
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:AEW02040.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_1120_19
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27564..27971)
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003713AA1
class I peptide chain release factor; K15034 ribosome-associated protein
Class I peptide chain release factor {ECO:0000313|EMBL:ACU57914.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids1_trim150_scaffold_1120_20
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

28099..28863
DNA (765bp) protein (255aa)
geranylgeranylglyceryl phosphate synthase; K07094 putative glycerol-1-phosphate prenyltransferase [EC:2.5.1.-]
Geranylgeranylglyceryl phosphate synthase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL78_NIAKG
Geranylgeranylglyceryl phosphate synthase {ECO:0000313|EMBL:AEW01919.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_1120_21
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28860..29576)
DNA (717bp) protein (239aa)
Two component transcriptional regulator, LytTR family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL87_NIAKG
Putative two-component response regulator {ECO:0000313|EMBL:GAO41727.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
LytTR family two component transcriptional regulator
scnpilot_solids1_trim150_scaffold_1120_22
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(29606..30832)
DNA (1227bp) protein (409aa)
Putative signal transduction histidine kinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL88_NIAKG
putative signal transduction histidine kinase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids1_trim150_scaffold_1120_23
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

31048..31458
DNA (411bp) protein (137aa)
Holliday junction DNA helicase subunit RuvB; K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12]
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP50_NIAKG
scnpilot_solids1_trim150_scaffold_1120_24
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

31418..32038
DNA (621bp) protein (207aa)
Holliday junction DNA helicase subunit RuvB; K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12]
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP50_NIAKG
scnpilot_solids1_trim150_scaffold_1120_25
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

32188..32748
DNA (561bp) protein (187aa)
uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
S-adenosylmethionine-dependent methyltransferase n=1 Tax=Niabella aurantiaca RepID=UPI0003604065
SAM-dependent methyltransferase {ECO:0000313|EMBL:KIC90624.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
scnpilot_solids1_trim150_scaffold_1120_26
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

32929..33417
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFA2_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV97312.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_1120_27
unknown

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comp(33484..33594)
DNA (111bp) protein (37aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1120_28
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

33720..35237
DNA (1518bp) protein (506aa)
Probable malate:quinone oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00212}; EC=1.1.5.4 {ECO:0000256|HAMAP-Rule:MF_00212};; MQO {ECO:0000256|HAMAP-Rule:MF_00212}; Malate dehydrogenase [quinone] {ECO:0000256|HAMAP-Rule:MF_00212}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
malate/quinone oxidoreductase (EC:1.1.5.4); K00116 malate dehydrogenase (quinone) [EC:1.1.5.4]
Probable malate:quinone oxidoreductase n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GJM3_9BACT
scnpilot_solids1_trim150_scaffold_1120_29
RBG_13_Bacteroidetes_42_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35336..36283)
DNA (948bp) protein (316aa)
Putative uncharacterized protein id=3638760 bin=GWF2_Bacteroidetes_41_9 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_41_9 organism_group=Bacteroidetes
arabinose efflux permease family protein
Tax=RBG_13_Bacteroidetes_42_15_curated
Displaying 29 items

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