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scnpilot_solids1_trim150_scaffold_1226

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1226_1
Bergeyella zoohelcum, Bergeyella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(11..718)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Bergeyella zoohelcum ATCC 43767 RepID=K1LVP2_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EKB54133.1}; TaxID=883096 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Bergeyella.;" source="Bergeyella zoohelcum ATCC 43767.;"
LytTR family two component transcriptional regulator
scnpilot_solids1_trim150_scaffold_1226_2
Bergeyella zoohelcum, Bergeyella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(721..1833)
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Bergeyella zoohelcum ATCC 43767 RepID=K1LPU7_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EKB54132.1}; TaxID=883096 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Bergeyella.;" source="Bergeyella zoohelcum ATCC 43767.;"
signal transduction histidine kinase LytS
scnpilot_solids1_trim150_scaffold_1226_3
Bergeyella zoohelcum, Bergeyella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1839..3041)
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=Bergeyella zoohelcum ATCC 43767 RepID=K1LC07_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EKB54130.1}; TaxID=883096 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Bergeyella.;" source="Bergeyella zoohelcum ATCC 43767.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1226_4
unknown

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comp(3038..3127)
DNA (90bp) protein (30aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1226_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3470..5383
DNA (1914bp) protein (638aa)
DNA topoisomerase type IIA subunit B domain-containing protein; K02622 topoisomerase IV subunit B [EC:5.99.1.-]
DNA topoisomerase type IIA subunit B region 2 domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE73_NIAKG
DNA topoisomerase type IIA subunit B region 2 domain protein {ECO:0000313|EMBL:AEV97264.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_1226_6
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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5397..6212
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NMU3_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF14429.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1226_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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6205..6780
DNA (576bp) protein (192aa)
peptidyl-tRNA hydrolase; K01056 peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037BFCB3
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids1_trim150_scaffold_1226_8
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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6862..7473
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003732C2E
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase {ECO:0000313|EMBL:KIC89499.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
fumarylacetoacetate (FAA) hydrolase
scnpilot_solids1_trim150_scaffold_1226_9
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7535..7972)
DNA (438bp) protein (146aa)
SsrA-binding protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAC1_CHIPD
SsrA-binding protein; K03664 SsrA-binding protein
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids1_trim150_scaffold_1226_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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comp(7985..8893)
DNA (909bp) protein (303aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; K01963 acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2]
acetyl-CoA carboxylase carboxyl transferase subunit beta n=1 Tax=Segetibacter koreensis RepID=UPI0003724CA1
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids1_trim150_scaffold_1226_11
Leptonema illini, Leptonema, Spirochaetia, Spirochaetes, Bacteria

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comp(8941..9996)
DNA (1056bp) protein (352aa)
deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; K01623 fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
Fructose-bisphosphate aldolase {ECO:0000313|EMBL:EHQ05018.1}; EC=4.1.2.13 {ECO:0000313|EMBL:EHQ05018.1};; TaxID=929563 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptonema.;" source="Leptonema illini DSM 21528.;"
Fructose-bisphosphate aldolase n=1 Tax=Leptonema illini DSM 21528 RepID=H2CJV4_9LEPT rbh
scnpilot_solids1_trim150_scaffold_1226_12
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(10118..10921)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TN49_NIAKG
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids1_trim150_scaffold_1226_13
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11017..12228
DNA (1212bp) protein (404aa)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
succinyl-CoA ligase subunit beta; K01903 succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
Succinyl-CoA ligase [ADP-forming] subunit beta n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQP4_NIAKG
scnpilot_solids1_trim150_scaffold_1226_14
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(12288..13490)
DNA (1203bp) protein (401aa)
Glycosyl transferase, group 2 family protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JSN8_9BACT
Glycosyl transferase, group 2 family protein {ECO:0000313|EMBL:ELR71986.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
family 2 glycosyl transferase
scnpilot_solids1_trim150_scaffold_1226_15
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13702..14793
DNA (1092bp) protein (364aa)
PA14 domain protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAG2_CHIPD
PA14 domain-containing protein
PA14 domain protein {ECO:0000313|EMBL:ACU61166.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Displaying 15 items

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