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scnpilot_solids1_trim150_scaffold_1368

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1368_1
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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145..942
DNA (798bp) protein (266aa)
Short chain dehydrogenase/reductase family oxidoreductase n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SAZ7_9FLAO rbh
Short chain dehydrogenase/reductase family oxidoreductase {ECO:0000313|EMBL:ESU23629.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
short chain dehydrogenase/reductase family oxidoreductase
scnpilot_solids1_trim150_scaffold_1368_2
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1323..1997)
DNA (675bp) protein (225aa)
TetR family transcriptional regulator n=1 Tax=Methylosarcina fibrata RepID=UPI0003641CF4 rbh
TetR family transcriptional regulator {ECO:0000313|EMBL:KIC91671.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
transcriptional regulator
scnpilot_solids1_trim150_scaffold_1368_3
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2121..2777
DNA (657bp) protein (219aa)
SNARE associated Golgi protein-related protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C1N2_SPHS2
Alkaline phosphatase {ECO:0000313|EMBL:KIC96251.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein; K03975 membrane-associated protein
scnpilot_solids1_trim150_scaffold_1368_4
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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2792..3220
DNA (429bp) protein (143aa)
Putative periplasmic protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X135_FLAB3
Uncharacterized protein {ECO:0000313|EMBL:KJJ40132.1}; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Vitellibacter.;" source="Vitellibacter vladivostokensis.;"
periplasmic protein
scnpilot_solids1_trim150_scaffold_1368_5
Chryseobacterium solincola, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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3256..3504
DNA (249bp) protein (83aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X160_FLAB3
Uncharacterized protein {ECO:0000313|EMBL:KIA82390.1}; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;"
hypothetical protein; K09981 hypothetical protein
scnpilot_solids1_trim150_scaffold_1368_6
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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3525..4469
DNA (945bp) protein (315aa)
Integral membrane protein, TerC family n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YYT7_AEQSU rbh
Membrane protein {ECO:0000313|EMBL:KJJ38061.1}; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Vitellibacter.;" source="Vitellibacter vladivostokensis.;"
TerC family integral membrane protein rbh
scnpilot_solids1_trim150_scaffold_1368_7
Aequorivita sublithincola, Aequorivita, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(4854..5348)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YYS1_AEQSU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL82139.1}; TaxID=746697 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aequorivita.;" source="Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 /; 9-3).;"
scnpilot_solids1_trim150_scaffold_1368_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(5599..7254)
DNA (1656bp) protein (552aa)
alpha-glucan phosphorylase; K00688 starch phosphorylase [EC:2.4.1.1]
Alpha-glucan phosphorylase {ECO:0000313|EMBL:AEW00624.1}; EC=2.4.1.1 {ECO:0000313|EMBL:AEW00624.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Alpha-glucan phosphorylase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TH13_NIAKG
scnpilot_solids1_trim150_scaffold_1368_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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7720..8643
DNA (924bp) protein (308aa)
6-phosphofructokinase; K00850 6-phosphofructokinase [EC:2.7.1.11]
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:0000256|HAMAP-Rule:MF_00339};; Phosphohexokinase {ECO:0000256|HAMAP-Rule:MF_00339}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
6-phosphofructokinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGD7_NIAKG
scnpilot_solids1_trim150_scaffold_1368_10
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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8680..10173
DNA (1494bp) protein (498aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
pyruvate kinase; K00873 pyruvate kinase [EC:2.7.1.40]
Pyruvate kinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGD6_NIAKG
scnpilot_solids1_trim150_scaffold_1368_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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10232..11164
DNA (933bp) protein (311aa)
aspartate carbamoyltransferase; K00609 aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Aspartate carbamoyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJ25_NIAKG
scnpilot_solids1_trim150_scaffold_1368_12
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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11172..11657
DNA (486bp) protein (162aa)
Phosphopantetheine adenylyltransferase; K00954 pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036E0C3D
scnpilot_solids1_trim150_scaffold_1368_13
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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11654..12088
DNA (435bp) protein (145aa)
Phenylacetic acid degradation-related protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJ27_NIAKG
phenylacetic acid degradation-related protein
Phenylacetic acid degradation-related protein {ECO:0000313|EMBL:AEV97544.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_1368_14
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(12085..12705)
DNA (621bp) protein (207aa)
NUDIX hydrolase n=1 Tax=Niabella soli DSM 19437 RepID=H1NLK2_9SPHI
NUDIX hydrolase {ECO:0000313|EMBL:AHF14804.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
NUDIX hydrolase
scnpilot_solids1_trim150_scaffold_1368_15
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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12724..13359
DNA (636bp) protein (212aa)
orotate phosphoribosyltransferase; K00762 orotate phosphoribosyltransferase [EC:2.4.2.10]
Orotate phosphoribosyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJ29_NIAKG
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids1_trim150_scaffold_1368_16
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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13466..13702
DNA (237bp) protein (79aa)
Heavy metal transport/detoxification protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PI70_CHIPD
Putative heavy metal-binding protein {ECO:0000313|EMBL:GAO44360.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
heavy metal transport/detoxification protein
Displaying 16 items

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