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scnpilot_solids1_trim150_scaffold_1505

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1505_1
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3..257
DNA (255bp) protein (85aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI00036AA6E0
Uncharacterized protein {ECO:0000313|EMBL:KIC89572.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1505_2
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

257..1540
DNA (1284bp) protein (428aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI0002D4CD8F
Uncharacterized protein {ECO:0000313|EMBL:AHM62708.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1505_3
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1542..1880
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037285E6
FeS assembly SUF system protein SufT {ECO:0000313|EMBL:KIC89574.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1505_4
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1896..2315
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037B729B
Rrf2 family transcriptional regulator {ECO:0000313|EMBL:KIC89575.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
BadM/Rrf2 family transcriptional regulator
scnpilot_solids1_trim150_scaffold_1505_5
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2349..2777)
DNA (429bp) protein (143aa)
AIG2 family protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NS72_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KIC96074.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
AIG2 family protein
scnpilot_solids1_trim150_scaffold_1505_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2805..4364)
DNA (1560bp) protein (520aa)
lysyl-tRNA synthetase; K04567 lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
lysyl-tRNA synthetase n=1 Tax=Segetibacter koreensis RepID=UPI00037D62D5
scnpilot_solids1_trim150_scaffold_1505_7
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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4640..4807
DNA (168bp) protein (56aa)
50S ribosomal protein L34 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PMK9_CHIPD
50S ribosomal protein L34; K02914 large subunit ribosomal protein L34
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|RuleBase:RU000566}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids1_trim150_scaffold_1505_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4876..5307
DNA (432bp) protein (144aa)
Ribonuclease P protein component; K03536 ribonuclease P protein component [EC:3.1.26.5]
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 1146
Ribonuclease P protein component n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THH7_NIAKG
scnpilot_solids1_trim150_scaffold_1505_9
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5285..6106)
DNA (822bp) protein (274aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036FD459
Short-chain dehydrogenase {ECO:0000313|EMBL:KIC91177.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
short chain dehydrogenase; K13775 citronellol/citronellal dehydrogenase
scnpilot_solids1_trim150_scaffold_1505_10
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6255..6932)
DNA (678bp) protein (226aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y5K1_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KEQ29213.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1505_11
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

7217..7717
DNA (501bp) protein (167aa)
Putative membrane protein n=1 Tax=Bizionia argentinensis JUB59 RepID=G2E9L2_9FLAO
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids1_trim150_scaffold_1505_12
Hymenobacter sp. DG25B, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

8401..9450
DNA (1050bp) protein (350aa)
putative nitrite reductase; K00368 nitrite reductase (NO-forming) [EC:1.7.2.1]
hypothetical protein n=1 Tax=Hymenobacter aerophilus RepID=UPI000368E0E3
Nitrite reductase {ECO:0000313|EMBL:AIZ65090.1}; TaxID=1385664 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. DG25B.;"
scnpilot_solids1_trim150_scaffold_1505_13
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9665..10282
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Hymenobacter aerophilus RepID=UPI0003748D7E
Uncharacterized protein {ECO:0000313|EMBL:KIC94257.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1505_14
Flavobacterium columnare, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

10282..10890
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Hymenobacter aerophilus RepID=UPI00037877C7
SCO1/SenC/PrrC family protein; K07152
SCO1/SenC/PrrC family protein {ECO:0000313|EMBL:AEW85157.1}; TaxID=1041826 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium columnare (strain ATCC 49512 / CIP 103533 / TG 44/87).;"
scnpilot_solids1_trim150_scaffold_1505_15
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

comp(11155..12525)
DNA (1371bp) protein (457aa)
Uncharacterized protein n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7N8Z0_9BACT
thrombospondin type 3 repeat family protein/Calx-beta domain-containing protein
Tax=CG_Bacteroid_02
scnpilot_solids1_trim150_scaffold_1505_16
GWF1_Flavobacteria_32_7_curated, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12522..15611)
DNA (3090bp) protein (1030aa)
CHU large protein; uncharacterized id=2678065 bin=GWF1_Flavobacteria_32_7 species=Flavobacteria bacterium BAL38 genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF1_Flavobacteria_32_7 organism_group=Bacteroidetes
hypothetical protein
Tax=GWF1_Flavobacteria_32_7_curated
scnpilot_solids1_trim150_scaffold_1505_17
Chryseobacterium sp. JM1, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15674..17905)
DNA (2232bp) protein (744aa)
Aminopeptidase M1 family protein n=1 Tax=Formosa sp. AK20 RepID=M7MLU1_9FLAO
Peptidase M1 {ECO:0000313|EMBL:KFF20881.1}; TaxID=1233950 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. JM1.;"
peptidase M1 membrane alanine aminopeptidase
scnpilot_solids1_trim150_scaffold_1505_18
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18105..18827
DNA (723bp) protein (241aa)
DNA repair protein RecO n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMI5_NIAKG
DNA replication and repair protein RecO; K03584 DNA repair protein RecO (recombination protein O)
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_1505_19
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18939..20000
DNA (1062bp) protein (354aa)
Peptide chain release factor 1 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMI7_NIAKG
peptide chain release factor 1 (bRF-1); K02835 peptide chain release factor 1
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_1505_20
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

21131..24364
DNA (3234bp) protein (1078aa)
Glycosyl transferase n=1 Tax=Flavobacterium sp. CF136 RepID=J2K0R7_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KIA90644.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
glycosyl transferase family protein
Displaying 20 items

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