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scnpilot_solids1_trim150_scaffold_1792

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1792_1
unknown

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2..466
DNA (465bp) protein (155aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1792_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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848..1450
DNA (603bp) protein (201aa)
RNA polymerase sigma factor n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7R3_NIAKG
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_1792_3
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1816..3249
DNA (1434bp) protein (478aa)
ATPase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YFU8_9SPHI rbh
ATPase {ECO:0000313|EMBL:EHQ25339.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
ATPase; K06921 rbh
scnpilot_solids1_trim150_scaffold_1792_4
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3960..5144
DNA (1185bp) protein (395aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037811F6
FecR protein rbh
FecR protein {ECO:0000313|EMBL:ACU03596.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_solids1_trim150_scaffold_1792_5
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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5337..8765
DNA (3429bp) protein (1143aa)
TonB-dependent receptor plug n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XZ70_PEDHD
TonB-dependent receptor plug {ECO:0000313|EMBL:AHM63014.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
TonB-dependent receptor plug
scnpilot_solids1_trim150_scaffold_1792_6
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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8787..10427
DNA (1641bp) protein (547aa)
Putative uncharacterized protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XZ71_PEDHD
Uncharacterized protein {ECO:0000313|EMBL:AHM63015.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1792_7
BJP_08E140C01_Bacteriodales_41_10, Bacteriodales, Bacteroidia, Bacteroidetes, Bacteria

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10616..13255
DNA (2640bp) protein (880aa)
Tax=BJP_08E140C01_Bacteriodales_41_10
scnpilot_solids1_trim150_scaffold_1792_8
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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13270..14454
DNA (1185bp) protein (395aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
N-acetylglucosamine 6-phosphate deacetylase (EC:3.5.1.25); K01443 N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036F2C49
scnpilot_solids1_trim150_scaffold_1792_9
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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14571..15278
DNA (708bp) protein (236aa)
glucosamine/galactosamine-6-phosphate isomerase; K02564 glucosamine-6-phosphate deaminase [EC:3.5.99.6]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003696400
Glucosamine-6-phosphate deaminase {ECO:0000313|EMBL:AHM63022.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
scnpilot_solids1_trim150_scaffold_1792_10
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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15439..16785
DNA (1347bp) protein (449aa)
major facilitator transporter n=1 Tax=Segetibacter koreensis RepID=UPI00037D626F
glucose/galactose transporter
Glucose/galactose transporter {ECO:0000313|EMBL:AHM63023.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
scnpilot_solids1_trim150_scaffold_1792_11
RBG_16_Aminicenantes_63_16_curated, Aminicenantes, Bacteria

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16807..19986
DNA (3180bp) protein (1060aa)
hypothetical protein n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B5B840
Tax=RBG_16_Aminicenantes_63_16_curated
scnpilot_solids1_trim150_scaffold_1792_12
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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20376..21200
DNA (825bp) protein (275aa)
Contig31, whole genome shotgun sequence {ECO:0000313|EMBL:KIO77661.1}; EC=1.1.1.131 {ECO:0000313|EMBL:KIO77661.1};; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KZ37_HALH1 rbh
3-oxoacyl-ACP reductase rbh
scnpilot_solids1_trim150_scaffold_1792_13
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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21240..22265
DNA (1026bp) protein (342aa)
PfkB domain-containing protein; K00874 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
PfkB domain protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1XZR0_9SPHI
PfkB domain protein {ECO:0000313|EMBL:EHQ27752.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
scnpilot_solids1_trim150_scaffold_1792_14
Cyclobacteriaceae bacterium AK24, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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22320..22823
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Cyclobacteriaceae bacterium AK24 RepID=R7ZZ47_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EON79329.1}; TaxID=1288963 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; unclassified Cyclobacteriaceae.;" source="Cyclobacteriaceae bacterium AK24.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1792_15
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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22848..23510
DNA (663bp) protein (221aa)
4-Hydroxy-2-oxoglutarate aldolase {ECO:0000313|EMBL:EOR94747.1}; EC=4.1.2.14 {ECO:0000313|EMBL:EOR94747.1};; EC=4.1.3.16 {ECO:0000313|EMBL:EOR94747.1};; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
2-dehydro-3-deoxyphosphogluconate aldolase; K01625 2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.16]
4-Hydroxy-2-oxoglutarate aldolase n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GSC4_9SPHI
scnpilot_solids1_trim150_scaffold_1792_16
CG_Flavo_01, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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23932..24165
DNA (234bp) protein (78aa)
Thioredoxin n=1 Tax=Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1) RepID=G2PIQ3_MURRD
thioredoxin
Tax=CG_Flavo_01
scnpilot_solids1_trim150_scaffold_1792_17
CG_Flavo_01, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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24213..24950
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1) RepID=G2PIQ2_MURRD rbh
hypothetical protein rbh
Tax=CG_Flavo_01
scnpilot_solids1_trim150_scaffold_1792_18
Muricauda ruestringensis, Muricauda, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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25132..25614
DNA (483bp) protein (161aa)
Regulatory protein MarR n=1 Tax=Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1) RepID=G2PIP9_MURRD
regulatory protein MarR
Regulatory protein MarR {ECO:0000313|EMBL:AEM71794.1}; TaxID=886377 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Muricauda.;" source="Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1).;"
Displaying 18 items

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