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scnpilot_solids1_trim150_scaffold_1870

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1870_1
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(3..854)
DNA (852bp) protein (284aa)
Putative uncharacterized protein id=2130092 bin=GWD2_RBX1-related_39_127 species=GWA2_TM6_36_9 genus=GWA2_TM6_36_9 taxon_order=GWA2_TM6_36_9 taxon_class=GWA2_TM6_36_9 phylum=TM6 tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
hypothetical protein
Tax=GWF2_RBX1_38_17_curated
scnpilot_solids1_trim150_scaffold_1870_2
GWE2_Bacteroidetes_39_28_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1160..1831)
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00037CB6DB
hypothetical protein
Tax=GWE2_Bacteroidetes_39_28_curated
scnpilot_solids1_trim150_scaffold_1870_3
GWE2_Bacteroidetes_39_28_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1834..2820)
DNA (987bp) protein (329aa)
CRISPR-associated autoregulator, DevR family id=2137786 bin=GWE2_Bacteroidetes_39_28 species=Thermoanaerobacterium thermosaccharolyticum genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes rbh
CRISPR-associated autoregulator, DevR family rbh
Tax=GWE2_Bacteroidetes_39_28_curated
scnpilot_solids1_trim150_scaffold_1870_4
GWE2_Bacteroidetes_39_28_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2850..4595)
DNA (1746bp) protein (582aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00036A08FD rbh
hypothetical protein rbh
Tax=GWE2_Bacteroidetes_39_28_curated
scnpilot_solids1_trim150_scaffold_1870_5
GWE2_Bacteroidetes_39_28_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4601..7018)
DNA (2418bp) protein (806aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00037FCCE1 rbh
CRISPR-associated helicase Cas3; K07012 rbh
Tax=GWE2_Bacteroidetes_39_28_curated
scnpilot_solids1_trim150_scaffold_1870_6
Bacteroides faecis CAG:32, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7093..8490)
DNA (1398bp) protein (466aa)
Uncharacterized protein n=1 Tax=Bacteroides faecis CAG:32 RepID=R6V5S6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDC89634.1}; TaxID=1263044 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides faecis CAG:32.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1870_7
Joostella marina, Joostella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8801..9517)
DNA (717bp) protein (239aa)
Putative transcriptional regulator n=1 Tax=Joostella marina DSM 19592 RepID=I3C4Z9_9FLAO
Putative transcriptional regulator {ECO:0000313|EMBL:EIJ38692.1}; TaxID=926559 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Joostella.;" source="Joostella marina DSM 19592.;"
Predicted transcriptional regulator
scnpilot_solids1_trim150_scaffold_1870_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9530..10324)
DNA (795bp) protein (265aa)
CRISPR-associated protein Cas6 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TRE8_NIAKG
CRISPR-associated protein Cas6
CRISPR-associated protein Cas6 {ECO:0000313|EMBL:AEW01079.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_1870_trna_1
unknown

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comp(10982..11054)
DNA (73bp)
transferRNA Thr
scnpilot_solids1_trim150_scaffold_1870_9
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11232..12656
DNA (1425bp) protein (475aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI000313C438
MFS transporter {ECO:0000313|EMBL:EZQ15004.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
major facilitator superfamily protein
scnpilot_solids1_trim150_scaffold_1870_10
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13077..13712)
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00036EF5CA
Uncharacterized protein {ECO:0000313|EMBL:KGO83390.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
uspA; Universal stress protein UspA
scnpilot_solids1_trim150_scaffold_1870_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13756..14673)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TD19_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV98251.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_1870_12
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14710..15534)
DNA (825bp) protein (275aa)
UspA domain-containing protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJU0_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC92857.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
UspA domain-containing protein
scnpilot_solids1_trim150_scaffold_1870_13
Flavobacterium limnosediminis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16068..16697)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SFR9_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU25294.1}; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1870_14
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16708..17304
DNA (597bp) protein (199aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Niabella soli DSM 19437 RepID=H1NNE4_9SPHI
PAS/PAC sensor signal transduction histidine kinase
scnpilot_solids1_trim150_scaffold_1870_15
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17504..18553
DNA (1050bp) protein (350aa)
PHP domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJA3_NIAKG
PHP domain-containing protein; K02347 DNA polymerase (family X)
PHP domain protein {ECO:0000313|EMBL:AEV98636.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_1870_16
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18570..19268)
DNA (699bp) protein (233aa)
zinc-binding alcohol dehydrogenase family protein; K13953 alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
Zinc-binding alcohol dehydrogenase family protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJA7_NIAKG
Zinc-binding alcohol dehydrogenase family protein {ECO:0000313|EMBL:AEV98640.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_1870_17
unknown

Not on your lists

19714..19818
DNA (105bp) protein (35aa)

This feature has no annotations

Displaying 18 items

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