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scnpilot_solids1_trim150_scaffold_1986

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1986_1
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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75..464
DNA (390bp) protein (130aa)
Single-stranded DNA-binding protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FS13_9SPHI
Single-stranded DNA-binding protein {ECO:0000256|PIRNR:PIRNR002070, ECO:0000256|RuleBase:RU000524}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
single-strand binding protein; K03111 single-strand DNA-binding protein
scnpilot_solids1_trim150_scaffold_1986_2
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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505..1422
DNA (918bp) protein (306aa)
Phage/plasmid-related protein TIGR03299 n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0G302_ECHVK
phage/plasmid-like protein
Phage/plasmid-related protein TIGR03299 {ECO:0000313|EMBL:AGA79376.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
scnpilot_solids1_trim150_scaffold_1986_3
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1553..1930
DNA (378bp) protein (126aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YDT5_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ24275.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1986_4
Leadbetterella byssophila, Leadbetterella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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1943..2176
DNA (234bp) protein (78aa)
Putative uncharacterized protein n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RS69_LEAB4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ16721.1}; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15).;"
scnpilot_solids1_trim150_scaffold_1986_5
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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2615..3952
DNA (1338bp) protein (446aa)
putative transcriptional regulator; K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12]
transcriptional regulator n=1 Tax=Anaerophaga thermohalophila RepID=UPI000237C4CD
Uncharacterized protein {ECO:0000313|EMBL:KGO80766.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
scnpilot_solids1_trim150_scaffold_1986_6
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(4480..5850)
DNA (1371bp) protein (457aa)
1,4-alpha-glucan branching protein {ECO:0000313|EMBL:KIC93333.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
alpha amylase catalytic subunit id=4383095 bin=GWF2_Bacteroidetes_43_11 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes rbh
alpha amylase catalytic region rbh
scnpilot_solids1_trim150_scaffold_1986_7
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(5891..7189)
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NTL4_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF16803.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1986_8
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(7195..7806)
DNA (612bp) protein (204aa)
Phosphoesterase PA-phosphatase related n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAX4_CHIPD
PA-phosphatase-like phosphoesterase
Phosphoesterase PA-phosphatase related {ECO:0000313|EMBL:ACU59346.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids1_trim150_scaffold_1986_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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7883..10045
DNA (2163bp) protein (721aa)
Sulfatase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TI86_NIAKG
sulfatase
Sulfatase {ECO:0000313|EMBL:AEW00703.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_1986_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10052..11230
DNA (1179bp) protein (393aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003763EE2
sulfatase
Sulfatase {ECO:0000313|EMBL:AEW00703.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_1986_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11223..11810
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003763EE2
sulfatase
Sulfatase {ECO:0000313|EMBL:AEW00703.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Displaying 11 items

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