ggKbase home page

scnpilot_solids1_trim150_scaffold_1234_5

Organism: SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_40_703

near complete RP 49 / 55 MC: 2 BSCG 49 / 51 MC: 1 ASCG 12 / 38
Location: comp(5054..5527)

Top 3 Functional Annotations

Value Algorithm Source
YjgF family translation initiation inhibitor n=1 Tax=Flexithrix dorotheae RepID=UPI0003651470 similarity UNIREF
DB: UNIREF100
  • Identity: 68.4
  • Coverage: 152.0
  • Bit_score: 218
  • Evalue 3.60e-54
endoribonuclease L-PSP similarity KEGG
DB: KEGG
  • Identity: 65.6
  • Coverage: 151.0
  • Bit_score: 213
  • Evalue 6.20e-53
Endoribonuclease L-PSP {ECO:0000313|EMBL:AEW03481.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.6
  • Coverage: 151.0
  • Bit_score: 213
  • Evalue 2.80e-52

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 474
ATGTCTGATAGTATTGAACAAAAATTAAAAGAGCTGGGGTTAGAACTTCCGCCGGCACCTCCGGCAGCAGGCGTTTATCATCCTGTTCTTTTGCAAGGAAACCATTTGTATGTTTCCGGACAAGGGCCCATGCAATCTGACGGAACCTTTATCATTGGAAAAGTGGGTAAGGATATGGACACGCAGGCAGGTAAACTCGCTGCACGACAAGTAGGGCTTACCATACTTGCCACCATTCAAAAACATTTTGGTTCGCTCGATAAAATCAAACGGCTGGTTAAGTTGCTCGGCATGGTAAATTGTACCACAGATTTTGAAGAGCAACCGGCTGTCATCAACGGATGCAGTGAACTTTTTGCGGCTCTTTGGGGGCCGGAAAACGGAGTAGGTGTTCGCAGTTCTGTGGGGGTAGGTTCTCTCCCGGCAAACACTCCGGTTGAAATTGAAGCCATGTTTGAATTGAAGGAAGGGTGA
PROTEIN sequence
Length: 158
MSDSIEQKLKELGLELPPAPPAAGVYHPVLLQGNHLYVSGQGPMQSDGTFIIGKVGKDMDTQAGKLAARQVGLTILATIQKHFGSLDKIKRLVKLLGMVNCTTDFEEQPAVINGCSELFAALWGPENGVGVRSSVGVGSLPANTPVEIEAMFELKEG*