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scnpilot_solids1_trim150_scaffold_1234

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1234_1
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(148..1017)
DNA (870bp) protein (290aa)
Xylose isomerase domain-containing protein TIM barrel n=1 Tax=Niabella soli DSM 19437 RepID=H1NLL5_9SPHI rbh
Sugar phosphate isomerase {ECO:0000313|EMBL:AHF14801.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
xylose isomerase domain-containing protein rbh
scnpilot_solids1_trim150_scaffold_1234_2
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1031..1594)
DNA (564bp) protein (188aa)
twin-arginine translocation pathway signal protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B4A752
Uncharacterized protein {ECO:0000313|EMBL:GAO44232.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
twin-arginine translocation pathway signal
scnpilot_solids1_trim150_scaffold_1234_3
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(1600..3057)
DNA (1458bp) protein (486aa)
oxidoreductase n=1 Tax=Segetibacter koreensis RepID=UPI000381A1C4
Oxidoreductase {ECO:0000313|EMBL:AKD02078.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
dehydrogenase rbh
scnpilot_solids1_trim150_scaffold_1234_4
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3069..4748)
DNA (1680bp) protein (560aa)
Glucose-methanol-choline oxidoreductase n=1 Tax=Niabella soli DSM 19437 RepID=H1NJP1_9SPHI
GMC family oxidoreductase {ECO:0000313|EMBL:KIC92971.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
glucose-methanol-choline oxidoreductase
scnpilot_solids1_trim150_scaffold_1234_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5054..5527)
DNA (474bp) protein (158aa)
YjgF family translation initiation inhibitor n=1 Tax=Flexithrix dorotheae RepID=UPI0003651470
endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:AEW03481.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_1234_6
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5676..5954
DNA (279bp) protein (93aa)
MtN3 and saliva related transmembrane protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NUX3_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF15791.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1234_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(5991..6881)
DNA (891bp) protein (297aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036415AB
hydroxypyruvate isomerase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids1_trim150_scaffold_1234_8
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6878..8182)
DNA (1305bp) protein (435aa)
Nucleoside:H+ symporter n=1 Tax=Pedobacter sp. BAL39 RepID=A6EFU1_9SPHI
Nucleoside:H+ symporter {ECO:0000313|EMBL:EDM35650.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
nucleoside:proton symporter
scnpilot_solids1_trim150_scaffold_1234_9
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8222..9379
DNA (1158bp) protein (386aa)
Oxidoreductase domain protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XU44_PEDHD
Oxidoreductase {ECO:0000313|EMBL:KIA92932.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
oxidoreductase domain-containing protein
scnpilot_solids1_trim150_scaffold_1234_10
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9438..10493
DNA (1056bp) protein (352aa)
Xylose isomerase domain-containing protein TIM barrel n=1 Tax=Niabella soli DSM 19437 RepID=H1NLL8_9SPHI rbh
AP endonuclease {ECO:0000313|EMBL:AHF14798.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
xylose isomerase rbh
scnpilot_solids1_trim150_scaffold_1234_11
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10514..11251
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7N130_9BACT
Glycosyl hydrolase {ECO:0000313|EMBL:KIC89785.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1234_12
unknown

Not on your lists

11309..11584
DNA (276bp) protein (92aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1234_13
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11860..12705
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000375B6DB
Membrane protein {ECO:0000313|EMBL:AHF16339.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
membrane protein
scnpilot_solids1_trim150_scaffold_1234_14
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12709..13746
DNA (1038bp) protein (346aa)
Sulfate-transporting ATPase {ECO:0000313|EMBL:AEW00565.1}; EC=3.6.3.25 {ECO:0000313|EMBL:AEW00565.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Sulfate-transporting ATPase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFW6_NIAKG
sulfate-transporting ATPase
scnpilot_solids1_trim150_scaffold_1234_15
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13718..14698
DNA (981bp) protein (327aa)
ABC transporter permease protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y1T0_PEDHD
ABC transporter permease; K01992 ABC-2 type transport system permease protein
ABC transporter permease protein {ECO:0000313|EMBL:ACU05072.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
Displaying 15 items

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