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scnpilot_solids1_trim150_scaffold_2559_8

Organism: SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_40_703

near complete RP 49 / 55 MC: 2 BSCG 49 / 51 MC: 1 ASCG 12 / 38
Location: comp(6174..6752)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit n=1 Tax=Imtechella halotolerans K1 RepID=I0WDP0_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 43.7
  • Coverage: 190.0
  • Bit_score: 147
  • Evalue 1.20e-32
Uncharacterized protein {ECO:0000313|EMBL:ETN96032.1}; TaxID=1286632 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zhouia.;" source="Zhouia amylolytica AD3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.4
  • Coverage: 198.0
  • Bit_score: 163
  • Evalue 4.00e-37
RNA polymerase, sigma-24 subunit, ecf subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 39.1
  • Coverage: 184.0
  • Bit_score: 141
  • Evalue 2.80e-31

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Taxonomy

Zhouia amylolytica → Zhouia → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 579
TTGGAAAACAGGGAAGATAATATTTGGATTGAACAGATATTGAATGGAGATGAAATGCCATTCAGGCATCTCGTTGAAAAATATCAAAACCTGGTTTTTGCCATTGCTTTCAGAATTTTAGGCAACAGAGAAGATGCCGAAGATGCCGCTCAGGAGATTTTTGTAAAATGTTTTCACGGATTAGGGAAATTTAATAAGCAGGCCGCATTTTCTACCTGGCTGTATAAAATTGCTTTTAATCATTCCCTGGATCTGGCAAAGAAATTCAGGCATTCAAAGTATAAAACAGATTGGGAAAAAGCAGAGATTGGGAGCAGCATCACAAGTGAAACCCGGTCAGAATCGGAAATGGATTCCAGGATTATAAAAAGCATTCTGAAAGGCGCTATTGATTCCCTTCCTCCGGAGAGCAGGATCATCGTACTCCTCTATTATTATGAGAATCTTTCTCTCAAAGAGATTTCAGAGATCATGGGATTCAGAGAAAATAATCTGAAAATTAAACTTCACCGCATCCGGTCGAAACTGATGAAACAACTTCAAACAAAAGAAGAAATCATTTCCACATTAAATTTGTAA
PROTEIN sequence
Length: 193
LENREDNIWIEQILNGDEMPFRHLVEKYQNLVFAIAFRILGNREDAEDAAQEIFVKCFHGLGKFNKQAAFSTWLYKIAFNHSLDLAKKFRHSKYKTDWEKAEIGSSITSETRSESEMDSRIIKSILKGAIDSLPPESRIIVLLYYYENLSLKEISEIMGFRENNLKIKLHRIRSKLMKQLQTKEEIISTLNL*