ggKbase home page

scnpilot_solids1_trim150_scaffold_2559

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2559_1
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2..886)
DNA (885bp) protein (295aa)
erythrose 4-phosphate dehydrogenase; K00134 glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12]
Erythrose 4-phosphate dehydrogenase {ECO:0000313|EMBL:AEW02056.1}; EC=1.2.1.72 {ECO:0000313|EMBL:AEW02056.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Erythrose 4-phosphate dehydrogenase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNX1_NIAKG
scnpilot_solids1_trim150_scaffold_2559_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1135..1809)
DNA (675bp) protein (225aa)
phosphatidate cytidylyltransferase; K00981 phosphatidate cytidylyltransferase [EC:2.7.7.41]
Phosphatidate cytidylyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THJ7_NIAKG
Phosphatidate cytidylyltransferase {ECO:0000313|EMBL:AEW02843.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_2559_3
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(1818..2777)
DNA (960bp) protein (320aa)
Abortive infection protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NV65_9SPHI
Abortive infection protein; K07052
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids1_trim150_scaffold_2559_4
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2862..3899
DNA (1038bp) protein (346aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
NifR3 family TIM-barrel protein n=1 Tax=Niabella aurantiaca RepID=UPI000380578A
tRNA-U20-dihydrouridine synthase
scnpilot_solids1_trim150_scaffold_2559_5
Alistipes sp. CAG:514, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3942..4382
DNA (441bp) protein (147aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1262696 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:514.;"
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:514 RepID=R5BM78_9BACT
cytosine/adenosine deaminase
scnpilot_solids1_trim150_scaffold_2559_6
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

4590..5699
DNA (1110bp) protein (370aa)
fatty acid desaturase; K00508 linoleoyl-CoA desaturase [EC:1.14.19.3] rbh
Stearoyl-CoA 9-desaturase n=1 Tax=Elizabethkingia meningoseptica 502 RepID=T0PTF1_ELIME rbh
Stearoyl-CoA 9-desaturase {ECO:0000313|EMBL:KGO10638.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
scnpilot_solids1_trim150_scaffold_2559_7
unknown

Not on your lists

comp(5779..6168)
DNA (390bp) protein (130aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2559_8
Zhouia amylolytica, Zhouia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6174..6752)
DNA (579bp) protein (193aa)
ECF subfamily RNA polymerase sigma-24 subunit n=1 Tax=Imtechella halotolerans K1 RepID=I0WDP0_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ETN96032.1}; TaxID=1286632 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zhouia.;" source="Zhouia amylolytica AD3.;"
RNA polymerase, sigma-24 subunit, ecf subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily
scnpilot_solids1_trim150_scaffold_2559_9
Joostella marina, Joostella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

6883..7236
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Joostella marina DSM 19592 RepID=I3C757_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EIJ39450.1}; TaxID=926559 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Joostella.;" source="Joostella marina DSM 19592.;"
membrane protein
scnpilot_solids1_trim150_scaffold_2559_10
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7440..8054)
DNA (615bp) protein (205aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
Superoxide dismutase; K04564 superoxide dismutase, Fe-Mn family [EC:1.15.1.1]
Superoxide dismutase n=1 Tax=Niabella soli DSM 19437 RepID=H1NQ05_9SPHI
Displaying 10 items

View Taxonomy