ggKbase home page

scnpilot_solids1_trim150_scaffold_1056_13

Organism: SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_40_703

near complete RP 49 / 55 MC: 2 BSCG 49 / 51 MC: 1 ASCG 12 / 38
Location: comp(13708..14397)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L1 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUG3_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 79.9
  • Coverage: 229.0
  • Bit_score: 378
  • Evalue 6.70e-102
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.7
  • Coverage: 225.0
  • Bit_score: 380
  • Evalue 1.90e-102
rplA; 50S ribosomal protein L1; K02863 large subunit ribosomal protein L1 similarity KEGG
DB: KEGG
  • Identity: 79.9
  • Coverage: 229.0
  • Bit_score: 378
  • Evalue 2.10e-102

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flavihumibacter solisilvae → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 690
ATGATTACGAAAAAAAGAAAAGTCGCAAATACGAAAATAGAACCTGATAAATCGTACACGCTCAAAGAAGCATCGAGCCTTATCAGGGAAGTAAATACTACAAAGTTTGACAGCTCCGTAGATCTTCACATTCGTTTGGGTGTGGATCCCAAAAAAGCAGATCAGGCTGTGAGAGGAACTGTTTCTCTTCCTCACGGAACAGGTAAAACAAAAAGGGTATTGGTACTCTGCACCCCCGACAAAGAAGATGCTGCAAAGCAGGCCGGAGCGGATTATGTTGGTCTGGATGAATACATCACAAAGATTGAAGGTGGCTGGACAGATGTGGATGTGATTGTAGCCACACCTTCTGTAATGCCTAAAATCGGGCGCCTTGGTAGAATTCTTGGCCCCAGAAACCTGATGCCAAATCCGAAAACCGGAACGGTAACCAACGACGTGGAAGCAGCCATCCAGGATGTCAAAGGAGGTAAAATTGCTTTCAAGGTCGATAAAGCAGGTATCATCCACGCTTCAATCGGAAGGGTAAGTTTTACTGCAGACAAAATTGCTGCCAACAGCCAGGAATTAATCAATGCCATCATCAAATTAAAACCTGTTACAGCAAAAGGGATTTATCTGAAATCCCTGAGTATGGCAAGCTCAATGAGTCCCGGAATTCCCATTGACACCAAATCCGTTCAGAACTAA
PROTEIN sequence
Length: 230
MITKKRKVANTKIEPDKSYTLKEASSLIREVNTTKFDSSVDLHIRLGVDPKKADQAVRGTVSLPHGTGKTKRVLVLCTPDKEDAAKQAGADYVGLDEYITKIEGGWTDVDVIVATPSVMPKIGRLGRILGPRNLMPNPKTGTVTNDVEAAIQDVKGGKIAFKVDKAGIIHASIGRVSFTADKIAANSQELINAIIKLKPVTAKGIYLKSLSMASSMSPGIPIDTKSVQN*