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scnpilot_solids1_trim150_scaffold_1056

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1056_1
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(558..761)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDH1_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW00421.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_1056_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(758..967)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDH1_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW00421.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_1056_3
GWF2_Bacteroidetes_49_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1073..2461
DNA (1389bp) protein (463aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035FCAE1
amino acid permease; K03294 basic amino acid/polyamine antiporter, APA family
Tax=GWF2_Bacteroidetes_49_14_curated
scnpilot_solids1_trim150_scaffold_1056_4
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2521..3759
DNA (1239bp) protein (413aa)
hypothetical protein n=1 Tax=Clostridium arbusti RepID=UPI0002887FF7 rbh
hypothetical protein rbh
Tax=BJP_IG2102_Clostridiales_34_350
scnpilot_solids1_trim150_scaffold_1056_5
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3885..4964
DNA (1080bp) protein (360aa)
Oxidoreductase n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KYH6_HALH1
oxidoreductase
Oxidoreductase {ECO:0000313|EMBL:AEE49417.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
scnpilot_solids1_trim150_scaffold_1056_6
unknown

Not on your lists

comp(4984..5817)
DNA (834bp) protein (278aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1056_7
Sphingobacterium sp. ACCC 05744, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5839..7338)
DNA (1500bp) protein (500aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI000373B6CF
RagB/SusD domain-containing protein {ECO:0000313|EMBL:KGE14111.1}; TaxID=1229276 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ACCC 05744.;"
RagB/SusD domain-containing protein
scnpilot_solids1_trim150_scaffold_1056_8
Sphingobacterium paucimobilis, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7358..10501)
DNA (3144bp) protein (1048aa)
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2JET0_9SPHI rbh
Uncharacterized protein {ECO:0000313|EMBL:ERJ61173.1}; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium paucimobilis HER1398.;"
TonB-dependent receptor plug
scnpilot_solids1_trim150_scaffold_1056_9
unknown

Not on your lists

comp(10547..10639)
DNA (93bp) protein (31aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1056_10
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10651..12399)
DNA (1749bp) protein (583aa)
DNA polymerase III subunits gamma and tau; K02343 DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
DNA polymerase III subunit gamma/tau n=1 Tax=Niabella aurantiaca RepID=UPI00037F3504
DNA polymerase III subunit gamma/tau {ECO:0000313|EMBL:KIC92809.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
scnpilot_solids1_trim150_scaffold_1056_11
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(12616..12990)
DNA (375bp) protein (125aa)
50S ribosomal protein L7/L12 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUG5_CHIPD
rplL; 50S ribosomal protein L7/L12; K02935 large subunit ribosomal protein L7/L12
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids1_trim150_scaffold_1056_12
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(13157..13663)
DNA (507bp) protein (169aa)
50S ribosomal protein L10 n=1 Tax=Niabella aurantiaca RepID=UPI0003612CAB
50S ribosomal protein L10 {ECO:0000256|RuleBase:RU003636, ECO:0000256|SAAS:SAAS00104918}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
50S ribosomal protein L10; K02864 large subunit ribosomal protein L10
scnpilot_solids1_trim150_scaffold_1056_13
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(13708..14397)
DNA (690bp) protein (230aa)
50S ribosomal protein L1 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUG3_CHIPD
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
rplA; 50S ribosomal protein L1; K02863 large subunit ribosomal protein L1
scnpilot_solids1_trim150_scaffold_1056_14
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(14432..14878)
DNA (447bp) protein (149aa)
50S ribosomal protein L11 n=1 Tax=Niabella aurantiaca RepID=UPI000372BDFE
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11
scnpilot_solids1_trim150_scaffold_1056_15
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15114..16049)
DNA (936bp) protein (312aa)
GHMP kinase; K00869 mevalonate kinase [EC:2.7.1.36] rbh
GHMP kinase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9K8_FLUTR rbh
GHMP kinase {ECO:0000313|EMBL:AEA45189.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_solids1_trim150_scaffold_1056_16
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16056..17081)
DNA (1026bp) protein (342aa)
diphosphomevalonate decarboxylase; K01597 diphosphomevalonate decarboxylase [EC:4.1.1.33] rbh
Diphosphomevalonate decarboxylase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9K9_FLUTR rbh
Diphosphomevalonate decarboxylase {ECO:0000313|EMBL:AEA45190.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_solids1_trim150_scaffold_1056_17
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17092..17982)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9L0_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA45191.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_solids1_trim150_scaffold_1056_18
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17990..19327)
DNA (1338bp) protein (446aa)
hydroxymethylglutaryl-CoA reductase (EC:1.1.1.88); K00054 hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88] rbh
3-hydroxy-3-methylglutaryl coenzyme A reductase {ECO:0000256|RuleBase:RU361219}; Short=HMG-CoA reductase {ECO:0000256|RuleBase:RU361219};; EC=1.1.1.88 {ECO:0000256|RuleBase:RU361219};; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
Hydroxymethylglutaryl-CoA reductase, degradative n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9L1_FLUTR rbh
scnpilot_solids1_trim150_scaffold_1056_19
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19332..20351)
DNA (1020bp) protein (340aa)
Isopentenyl-diphosphate Delta-isomerase (EC:5.3.3.2); K01823 isopentenyl-diphosphate delta-isomerase [EC:5.3.3.2] rbh
Isopentenyl-diphosphate Delta-isomerase {ECO:0000313|EMBL:AEA45193.1}; EC=5.3.3.2 {ECO:0000313|EMBL:AEA45193.1};; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9L2_FLUTR rbh
scnpilot_solids1_trim150_scaffold_1056_20
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20516..21100)
DNA (585bp) protein (195aa)
Transcriptional regulator, AraC family n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W467_9FLAO
AraC family transcriptional regulator {ECO:0000313|EMBL:KIC93202.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1056_21
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21547..22050
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9Y4_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW01328.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_1056_22
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22223..24598)
DNA (2376bp) protein (792aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TC19_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV99312.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_1056_23
unknown

Not on your lists

comp(24612..25100)
DNA (489bp) protein (163aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1056_24
unknown

Not on your lists

comp(25105..25707)
DNA (603bp) protein (201aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1056_25

Not on your lists

comp(25904..26962)
DNA (1059bp) protein (353aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon GZfos23H9 RepID=Q64CG5_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:AAU82912.1}; TaxID=285391 species="Archaea; environmental samples.;" source="uncultured archaeon GZfos23H9.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1056_26
Flavobacterium reichenbachii, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27203..27553)
DNA (351bp) protein (117aa)
Transcriptional regulator, XRE family n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FC55_FLAJ1
XRE family transcriptional regulator
XRE family transcriptional regulator {ECO:0000313|EMBL:KFF03432.1}; TaxID=362418 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium reichenbachii.;"
Displaying 26 items

View Taxonomy