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scnpilot_solids1_trim150_scaffold_2359_2

Organism: SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_40_703

near complete RP 49 / 55 MC: 2 BSCG 49 / 51 MC: 1 ASCG 12 / 38
Location: 1605..2147

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Pedobacter sp. BAL39 RepID=A6EA47_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 34.7
  • Coverage: 173.0
  • Bit_score: 120
  • Evalue 2.00e-24
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:EDM38028.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 34.7
  • Coverage: 173.0
  • Bit_score: 120
  • Evalue 2.80e-24
RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 35.6
  • Coverage: 163.0
  • Bit_score: 119
  • Evalue 1.40e-24

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Taxonomy

Pedobacter sp. BAL39 → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 543
ATGATGGAATATCCTGCAATTGAGAAGACTAAATCCGACCGGGATCTTTTTACCTGTCTGTATCAGGAATACAGGCAGGTATTGTTTAAAAAATTTTTACCTCTTTTGAATTCTCCTGAAACGGTGAAAGATATTATTCAGGAAGTATTCATCAGGGCATGGATTAAACGTGAGGTGATAAAACCTGAATCTTCACTGAAAGGTTATATGTATAAGATTGGACAAAACCTCATTTTCGATTACTACAGGCAAAAGAGTGTCATGTACCAGTCTGCATGGTTATACCTGTGGCAGCAGGAGCAGGAATGGCCTGATGAAAACCAGGTTACCACAGAAGATAAGGTGGCAAAAATTGAGATGATCGTCAGTCAATTGCCTCCTCAAAGAAAAAGAGTATTTGAATTATGCAAGTATGAACAGAAGAGTTATCAGGAAGTCAGCAATGCCATGCACATATCACTATCAACGATCAGCGACCATATAGTAAAAGCAAAAAGTTTTATCAGATCGGAATTGGTAAGGGACTTTAGGATTGCAGGTTGA
PROTEIN sequence
Length: 181
MMEYPAIEKTKSDRDLFTCLYQEYRQVLFKKFLPLLNSPETVKDIIQEVFIRAWIKREVIKPESSLKGYMYKIGQNLIFDYYRQKSVMYQSAWLYLWQQEQEWPDENQVTTEDKVAKIEMIVSQLPPQRKRVFELCKYEQKSYQEVSNAMHISLSTISDHIVKAKSFIRSELVRDFRIAG*