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scnpilot_solids1_trim150_scaffold_2359

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2359_1
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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51..1571
DNA (1521bp) protein (507aa)
Ribulokinase {ECO:0000256|RuleBase:RU003455, ECO:0000256|SAAS:SAAS00183333}; EC=2.7.1.16 {ECO:0000256|RuleBase:RU003455, ECO:0000256|SAAS:SAAS00183333};; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
L-ribulokinase; K00853 L-ribulokinase [EC:2.7.1.16]
ribulokinase n=1 Tax=Pedobacter agri RepID=UPI000299ECC8
scnpilot_solids1_trim150_scaffold_2359_2
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1605..2147
DNA (543bp) protein (181aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Pedobacter sp. BAL39 RepID=A6EA47_9SPHI
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:EDM38028.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
RNA polymerase sigma-70 factor
scnpilot_solids1_trim150_scaffold_2359_3
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2170..3189
DNA (1020bp) protein (340aa)
Transcriptional regulator, LacI family n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C8Z6_SPHS2
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ADZ77185.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
scnpilot_solids1_trim150_scaffold_2359_4
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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3427..6540
DNA (3114bp) protein (1038aa)
TonB-dependent receptor plug n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VSK5_DYAFD
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:ACT92827.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_solids1_trim150_scaffold_2359_5
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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6559..8007
DNA (1449bp) protein (483aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00035F9AAA
RagB/SusD domain-containing protein
RagB/SusD domain protein {ECO:0000313|EMBL:ACT92826.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_solids1_trim150_scaffold_2359_6
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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8240..9226
DNA (987bp) protein (329aa)
Uncharacterized protein id=4483888 bin=GWC2_Bacteroidetes_46_850 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes rbh
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
Displaying 6 items

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