ggKbase home page

scnpilot_solids1_trim150_scaffold_2044

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2044_1
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..256
DNA (255bp) protein (85aa)
dolichol-phosphate mannosyltransferase n=1 Tax=Dyella ginsengisoli RepID=UPI00034AA288
glycosyl transferase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_2044_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

321..689
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WC54_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97045.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2044_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(750..1697)
DNA (948bp) protein (316aa)
Putative esterase of the alpha-beta hydrolase superfamily n=1 Tax=Rhodanobacter denitrificans RepID=I4WNC9_9GAMM
putative esterase of the alpha-beta hydrolase superfamily
Putative esterase of the alpha-beta hydrolase superfamily {ECO:0000313|EMBL:AGG90967.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_2044_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1893..3578
DNA (1686bp) protein (562aa)
Sodium (Na+) symporter n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUH6_9GAMM
Sodium (Na+) symporter {ECO:0000313|EMBL:EIL90867.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
sodium (Na+) symporter
scnpilot_solids1_trim150_scaffold_2044_5
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3674..4645)
DNA (972bp) protein (324aa)
Putative transcriptional regulator n=1 Tax=Rhodanobacter denitrificans RepID=I4WND0_9GAMM
putative transcriptional regulator
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_2044_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4793..5584
DNA (792bp) protein (264aa)
Putative salt-induced outer membrane protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUH9_9GAMM
Putative salt-induced outer membrane protein {ECO:0000313|EMBL:EIL90870.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative salt-induced outer membrane protein
scnpilot_solids1_trim150_scaffold_2044_7
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5822..6736)
DNA (915bp) protein (305aa)
hydroxymethylbilane synthase (EC:2.5.1.61)
Porphobilinogen deaminase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUI0_9GAMM
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_2044_8
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6878..7633
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WAH4_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_2044_9
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7728..10775)
DNA (3048bp) protein (1016aa)
acriflavine resistance protein B n=1 Tax=Dyella ginsengisoli RepID=UPI0003474D2A rbh
Acriflavine resistance protein B {ECO:0000313|EMBL:KGI79237.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
acriflavin resistance protein rbh
scnpilot_solids1_trim150_scaffold_2044_10
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10785..11945)
DNA (1161bp) protein (387aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034687CD
RND family efflux transporter MFP subunit
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
scnpilot_solids1_trim150_scaffold_2044_11
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12071..13567)
DNA (1497bp) protein (499aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00035DB3DA
Uncharacterized protein {ECO:0000313|EMBL:KGI79235.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
NodT family RND efflux system outer membrane lipoprotein
scnpilot_solids1_trim150_scaffold_2044_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13662..14195)
DNA (534bp) protein (178aa)
TonB family protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NMQ0_9GAMM
TonB family protein
TonB family protein {ECO:0000313|EMBL:AGG90918.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_2044_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14203..15204)
DNA (1002bp) protein (334aa)
Acetyl-CoA acetyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WGY0_9GAMM
acetyl-CoA acetyltransferase
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:AGG90919.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying 13 items

View Taxonomy