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scnpilot_solids1_trim150_scaffold_2113

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2113_1
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..490
DNA (489bp) protein (163aa)
DNA mismatch repair protein MutL n=1 Tax=Dyella japonica RepID=UPI0002F37806
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
DNA mismatch repair protein MutL
scnpilot_solids1_trim150_scaffold_2113_2
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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627..1556
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WAN9_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL96530.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2113_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1578..2360)
DNA (783bp) protein (261aa)
3-hydroxybutyryl-CoA dehydratase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W412_9GAMM
3-hydroxybutyryl-CoA dehydratase {ECO:0000313|EMBL:EIL94203.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
enoyl-CoA hydratase/carnithine racemase
scnpilot_solids1_trim150_scaffold_2113_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2477..3238
DNA (762bp) protein (254aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Rhodanobacter denitrificans RepID=M4NHT9_9GAMM
FKBP-type peptidyl-prolyl cis-trans isomerase
scnpilot_solids1_trim150_scaffold_2113_5
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3459..4052
DNA (594bp) protein (198aa)
NTP pyrophosphohydrolase n=1 Tax=Rhodanobacter denitrificans RepID=I4WPR0_9GAMM
NTP pyrophosphohydrolase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_2113_6
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4049..4903
DNA (855bp) protein (285aa)
Rhodanese-related sulfurtransferase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VPE4_9GAMM rbh
Rhodanese-related sulfurtransferase {ECO:0000313|EMBL:EIL89085.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
rhodanese-related sulfurtransferase
scnpilot_solids1_trim150_scaffold_2113_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4960..5724)
DNA (765bp) protein (255aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WB05_9GAMM
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:EIL96646.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
enoyl-CoA hydratase/carnithine racemase
scnpilot_solids1_trim150_scaffold_2113_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5741..7195)
DNA (1455bp) protein (485aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WPQ7_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89664.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_2113_9
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7344..7904
DNA (561bp) protein (187aa)
GNAT family acetyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WB03_9GAMM
acetyltransferase, N-acetylglutamate synthase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_2113_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7781..8452)
DNA (672bp) protein (224aa)
DNA-binding domain-containing protein, AraC-type n=1 Tax=Rhodanobacter denitrificans RepID=M4NHT6_9GAMM
DNA-binding domain-containing protein, AraC-type
DNA-binding domain-containing protein, AraC-type {ECO:0000313|EMBL:AGG89662.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_2113_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8460..8906)
DNA (447bp) protein (149aa)
Thioesterase superfamily protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WPQ4_9GAMM
putative thioesterase
Putative thioesterase {ECO:0000313|EMBL:AGG89661.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_2113_12
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8903..9538)
DNA (636bp) protein (212aa)
UvrABC system protein A n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WB01_9GAMM
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Excinuclease ABC subunit A
Displaying 12 items

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