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scnpilot_solids1_trim150_scaffold_2311

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2311_1
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..333)
DNA (333bp) protein (111aa)
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase (Fragment) n=1 Tax=Rhodanobacter sp. 115 RepID=I4VX58_9GAMM
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_2311_2
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(670..1701)
DNA (1032bp) protein (344aa)
CDP-glycerol glycerophosphotransferase n=1 Tax=Dyella ginsengisoli RepID=UPI000348D84D rbh
glycosyl/glycerophosphate transferase, teichoic acid biosynthesis
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_2311_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1698..2390)
DNA (693bp) protein (231aa)
Glycosyl transferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NL07_9GAMM
glycosyl transferase
Glycosyl transferase {ECO:0000313|EMBL:AGG90762.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_2311_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2688..3584
DNA (897bp) protein (299aa)
Two-domain glycosyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGN6_9GAMM
Two-domain glycosyltransferase {ECO:0000313|EMBL:EIL98627.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
glycosyl transferase
scnpilot_solids1_trim150_scaffold_2311_5
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3603..4880)
DNA (1278bp) protein (426aa)
RfaL protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VLP2_9GAMM rbh
RfaL protein {ECO:0000313|EMBL:EIL88133.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
lipid A core-O-antigen ligase-like enyme
scnpilot_solids1_trim150_scaffold_2311_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4948..6588)
DNA (1641bp) protein (547aa)
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NTE0_9GAMM rbh
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase rbh
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase {ECO:0000313|EMBL:AGG90756.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_2311_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6756..8057)
DNA (1302bp) protein (434aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00274011};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
16S rRNA m(5)C-967 methyltransferase (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase RsmB n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXT4_9GAMM
scnpilot_solids1_trim150_scaffold_2311_8
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8054..8995)
DNA (942bp) protein (314aa)
Methionyl-tRNA formyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WK56_9GAMM
methionyl-tRNA formyltransferase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_2311_9
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8992..9501)
DNA (510bp) protein (170aa)
peptide deformylase (EC:3.5.1.88)
Peptide deformylase n=1 Tax=Rhodanobacter denitrificans RepID=I4WK57_9GAMM
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_2311_10
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9690..10427
DNA (738bp) protein (246aa)
LysM domain-containing protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGM9_9GAMM
LysM domain-containing protein {ECO:0000313|EMBL:EIL98620.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
LysM domain-containing protein
Displaying 10 items

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