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scnpilot_solids1_trim150_scaffold_2346

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2346_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..1085)
DNA (1083bp) protein (361aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=666685 species="Bacteria; Pro
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Rhodanobacter denitrificans RepID=I4WLD4_9GAMM
ribosomal protein S12 methylthiotransferase RimO
scnpilot_solids1_trim150_scaffold_2346_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1195..1863
DNA (669bp) protein (223aa)
Carboxymethylenebutenolidase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRC2_9GAMM
Carboxymethylenebutenolidase {ECO:0000313|EMBL:EIM02014.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
dienelactone hydrolase-like enzyme
scnpilot_solids1_trim150_scaffold_2346_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1860..2279
DNA (420bp) protein (140aa)
Histidine triad (HIT) protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRC1_9GAMM
Histidine triad (HIT) protein {ECO:0000313|EMBL:EIM02013.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
HIT family hydrolase, diadenosine tetraphosphate hydrolase
scnpilot_solids1_trim150_scaffold_2346_4
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2281..2988
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00036BC5FC
Allophanate hydrolase {ECO:0000313|EMBL:AHX15480.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
allophanate hydrolase subunit 1
scnpilot_solids1_trim150_scaffold_2346_5
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2985..3965
DNA (981bp) protein (327aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034705D0 rbh
Uncharacterized protein {ECO:0000313|EMBL:AHX15479.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
atzFB; allophanate hydrolase subunit 2; K06350 antagonist of KipI
scnpilot_solids1_trim150_scaffold_2346_6
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3976..4740
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034D8914 rbh
UPF0271 protein CH75_21295 {ECO:0000256|HAMAP-Rule:MF_00691}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
LamB/YcsF family protein; K07160 UPF0271 protein
scnpilot_solids1_trim150_scaffold_2346_7
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4737..5426
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002E535CA rbh
Membrane protein {ECO:0000313|EMBL:AHX15477.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2346_8
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5429..6397
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002F86680 rbh
Uncharacterized protein {ECO:0000313|EMBL:AHX15476.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2346_9
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6412..7068
DNA (657bp) protein (219aa)
Pyrrolidone-carboxylate peptidase {ECO:0000256|HAMAP-Rule:MF_00417}; EC=3.4.19.3 {ECO:0000256|HAMAP-Rule:MF_00417};; 5-oxoprolyl-peptidase {ECO:0000256|HAMAP-Rule:MF_00417}; Pyroglutamyl-peptidase I {ECO:0000256|HAMAP-Rule:MF_00417}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000345D43D rbh
pyrrolidone-carboxylate peptidase
scnpilot_solids1_trim150_scaffold_2346_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7135..7614)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WLD1_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88478.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_2346_11
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7709..8275)
DNA (567bp) protein (189aa)
Deoxycytidine triphosphate deaminase {ECO:0000256|HAMAP-Rule:MF_00146}; Short=dCTP deaminase {ECO:0000256|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000256|HAMAP-Rule:MF_00146};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Deoxycytidine triphosphate deaminase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8H4_9GAMM
deoxycytidine triphosphate deaminase
scnpilot_solids1_trim150_scaffold_2346_12
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8453..8995)
DNA (543bp) protein (181aa)
NADPH-dependent FMN reductase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8H5_9GAMM
NADPH-dependent FMN reductase {ECO:0000313|EMBL:EIL95766.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
putative flavoprotein
scnpilot_solids1_trim150_scaffold_2346_13
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8992..9546)
DNA (555bp) protein (185aa)
Chromosome partitioning ATPase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRB8_9GAMM
Chromosome partitioning ATPase {ECO:0000313|EMBL:EIM02010.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
ATPase involved in chromosome partitioning
Displaying 13 items

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