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scnpilot_solids1_trim150_scaffold_2564

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2564_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..306
DNA (306bp) protein (102aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Dihydroxy-acid dehydratase n=1 Tax=Rhodanobacter denitrificans RepID=M4NTA0_9GAMM
dihydroxyacid dehydratase/phosphogluconate dehydratase
scnpilot_solids1_trim150_scaffold_2564_2
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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303..1313
DNA (1011bp) protein (337aa)
ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGJ0_9GAMM
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_2564_3
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1382..1723
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W9C7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL96068.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2564_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1773..3521
DNA (1749bp) protein (583aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
acetolactate synthase, large subunit (EC:2.2.1.6)
Acetolactate synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXX5_9GAMM
scnpilot_solids1_trim150_scaffold_2564_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3586..3834
DNA (249bp) protein (83aa)
acetolactate synthase, small subunit (EC:2.2.1.6)
Acetolactate synthase, small subunit {ECO:0000313|EMBL:AGG90719.1}; EC=2.2.1.6 {ECO:0000313|EMBL:AGG90719.1};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Acetolactate synthase, small subunit n=1 Tax=Rhodanobacter denitrificans RepID=I4WK91_9GAMM
scnpilot_solids1_trim150_scaffold_2564_6
unknown

Not on your lists

comp(4670..4795)
DNA (126bp) protein (42aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2564_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5391..6527)
DNA (1137bp) protein (379aa)
Diguanylate cyclase n=1 Tax=Rhodanobacter denitrificans RepID=I4WK89_9GAMM
diguanylate cyclase (GGDEF) domain-containing protein
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:AGG90721.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_2564_8
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6627..7364)
DNA (738bp) protein (246aa)
3-ketoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2M5_9GAMM
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_2564_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7378..7812)
DNA (435bp) protein (145aa)
Putative 3-hydroxylacyl-(Acyl carrier protein) dehydratase n=1 Tax=Rhodanobacter denitrificans RepID=I4WMW2_9GAMM
putative 3-hydroxylacyl-(acyl carrier protein) dehydratase
Putative 3-hydroxylacyl-(Acyl carrier protein) dehydratase {ECO:0000313|EMBL:AGG90822.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_2564_10
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7796..9886)
DNA (2091bp) protein (697aa)
Putative exporter n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VLD2_9GAMM
Putative exporter {ECO:0000313|EMBL:EIL88023.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
putative exporter
scnpilot_solids1_trim150_scaffold_2564_11
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9850..10398)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFP4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL98285.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2564_12
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10430..11386)
DNA (957bp) protein (319aa)
Acyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFP3_9GAMM
Acyltransferase {ECO:0000313|EMBL:EIL98284.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative acyltransferase
scnpilot_solids1_trim150_scaffold_2564_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11383..11685)
DNA (303bp) protein (101aa)
(3R)-hydroxymyristoyl-ACP dehydratase n=1 Tax=Rhodanobacter denitrificans RepID=I4WMW6_9GAMM
3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase
3-hydroxymyristoyl/3-hydroxydecanoyl-(Acyl carrier protein) dehydratase {ECO:0000313|EMBL:AGG90826.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_2564_14
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11682..12401)
DNA (720bp) protein (240aa)
Ketosynthase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFP1_9GAMM
Ketosynthase {ECO:0000313|EMBL:EIL98282.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2564_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12547..12813)
DNA (267bp) protein (89aa)
Acyl carrier protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2L8_9GAMM
Acyl carrier protein {ECO:0000313|EMBL:EIL93709.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
acyl carrier protein
scnpilot_solids1_trim150_scaffold_2564_16
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12833..13897
DNA (1065bp) protein (355aa)
Pteridine-dependent deoxygenase n=1 Tax=Rhodanobacter denitrificans RepID=I4WMW9_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90829.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_2564_17
unknown

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comp(13911..14483)
DNA (573bp) protein (191aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2564_18
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14597..15991)
DNA (1395bp) protein (465aa)
UDP-N-acetylglucosamine pyrophosphorylase (EC:2.7.7.23 2.3.1.157)
Bifunctional protein GlmU n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFN8_9GAMM
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids1_trim150_scaffold_2564_19
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16151..16723
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034615D5
Protein of unknown function (DUF3016)
Uncharacterized protein {ECO:0000313|EMBL:AGG87612.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_2564_20
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16748..17170)
DNA (423bp) protein (141aa)
ATP synthase epsilon chain n=1 Tax=Rhodanobacter denitrificans RepID=M4NL78_9GAMM
ATP synthase, F1 epsilon subunit
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_2564_21
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17287..17769)
DNA (483bp) protein (161aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
ATP synthase subunit beta n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFN5_9GAMM
ATP synthase, F1 beta subunit
Displaying 21 items

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