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scnpilot_solids1_trim150_scaffold_2728

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2728_1
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..269
DNA (267bp) protein (89aa)
Type VI secretion ATPase, ClpV1 family protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VWY6_9GAMM
Type VI secretion ATPase, ClpV1 family protein {ECO:0000313|EMBL:EIL91727.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
type VI secretion ATPase; K11907 type VI secretion system protein VasG
scnpilot_solids1_trim150_scaffold_2728_2
unknown

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390..1382
DNA (993bp) protein (331aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2728_3
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1552..2565
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Glaciecola arctica BSs20135 RepID=K6XC17_9ALTE rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_2728_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2857..4479
DNA (1623bp) protein (541aa)
Flavodoxin/nitric oxide synthase n=1 Tax=Rhodanobacter denitrificans RepID=I4WKZ9_9GAMM
Flavodoxin/nitric oxide synthase {ECO:0000313|EMBL:EIM00515.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
sulfite reductase, alpha subunit (flavoprotein)
scnpilot_solids1_trim150_scaffold_2728_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4487..5038)
DNA (552bp) protein (184aa)
Acetyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WKZ6_9GAMM
acetyltransferase, ribosomal protein N-acetylase
Acetyltransferase, ribosomal protein N-acetylase {ECO:0000313|EMBL:AGG88261.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_2728_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5045..5524)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WKZ5_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88262.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_2728_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5607..5945)
DNA (339bp) protein (113aa)
Competence protein ComEA-like protein with helix-hairpin-helix repeat region n=1 Tax=Rhodanobacter denitrificans RepID=M4NF81_9GAMM
competence protein ComEA-like protein with helix-hairpin-helix repeat region
Competence protein ComEA-like protein with helix-hairpin-helix repeat region {ECO:0000313|EMBL:AGG88263.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_2728_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6165..7757
DNA (1593bp) protein (531aa)
Acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WM29_9GAMM
Acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase {ECO:0000313|EMBL:EIM00521.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase
scnpilot_solids1_trim150_scaffold_2728_9
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7781..8356
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WM30_9GAMM
pyridoxal phosphate enzyme, YggS family
Uncharacterized protein {ECO:0000313|EMBL:EIM00522.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids1_trim150_scaffold_2728_10
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8539..9246
DNA (708bp) protein (236aa)
Cell wall-associated hydrolase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WM31_9GAMM
cell wall-associated hydrolase, invasion-associated protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_2728_11
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9400..10050
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VJI8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL87379.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2728_12
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10120..12960)
DNA (2841bp) protein (947aa)
RNA polymerase-associated protein RapA {ECO:0000256|HAMAP-Rule:MF_01821, ECO:0000256|SAAS:SAAS00010031}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01821, ECO:0000256|SAAS:SAAS00010033};; ATP-dependent helicase HepA {ECO:0000256|HAMAP-Rule:MF_01821}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
RNA polymerase-associated protein RapA n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WM34_9GAMM
DNA/RNA helicase, superfamily II, SNF2 family
scnpilot_solids1_trim150_scaffold_2728_13
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13031..13711)
DNA (681bp) protein (227aa)
PKHD-type hydroxylase ybiX; K07336 PKHD-type hydroxylase [EC:1.14.11.-]
PKHD-type hydroxylase UU9_16436 n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VJJ0_9GAMM
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_2728_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13749..15140)
DNA (1392bp) protein (464aa)
Catecholate siderophore receptor Fiu n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5K7_9GAMM
Catecholate siderophore receptor Fiu {ECO:0000313|EMBL:EIL94748.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
TonB-dependent siderophore receptor; K02014 iron complex outermembrane recepter protein
Displaying 14 items

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