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scnpilot_solids1_trim150_scaffold_2833

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2833_1
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..322
DNA (321bp) protein (107aa)
Putative glycosyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VSK1_9GAMM
putative glycosyltransferase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_2833_2
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

391..801
DNA (411bp) protein (137aa)
Putative permease, DMT superfamily protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJB5_9GAMM
putative permease, DMT superfamily
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_2833_3
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

774..1241
DNA (468bp) protein (156aa)
Putative permease, DMT superfamily n=1 Tax=Rhodanobacter denitrificans RepID=M4NJE8_9GAMM
putative permease, DMT superfamily
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_2833_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1229..1738)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VSJ7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90188.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2833_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1932..2126)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VSJ6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90187.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
uncharacterized small protein
scnpilot_solids1_trim150_scaffold_2833_6
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2128..4200)
DNA (2073bp) protein (691aa)
Carbon starvation protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VJ82_9GAMM rbh
Carbon starvation protein {ECO:0000313|EMBL:EIL87273.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
carbon starvation protein, predicted membrane protein
scnpilot_solids1_trim150_scaffold_2833_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4371..5153
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NBE9_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87929.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_2833_8
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5235..5771
DNA (537bp) protein (179aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Peptide deformylase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VNX5_9GAMM rbh
peptide deformylase
scnpilot_solids1_trim150_scaffold_2833_9
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5910..6278
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034B49FA
Uncharacterized protein {ECO:0000313|EMBL:EIL88917.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2833_10
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6307..6552)
DNA (246bp) protein (82aa)
Transcriptional activator FtrA n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VJ88_9GAMM
transcriptional activator FtrA; K13633 AraC family transcriptional regulator, transcriptional activator FtrA
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_2833_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6767..7024
DNA (258bp) protein (86aa)
Uncharacterized protein n=2 Tax=Rhodanobacter denitrificans RepID=M4NDH5_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87932.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_2833_12
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7093..7905)
DNA (813bp) protein (271aa)
Orotidine 5'-phosphate decarboxylase n=1 Tax=Rhodanobacter denitrificans RepID=M4NEI5_9GAMM
orotidine 5''-phosphate decarboxylase, subfamily 2
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_2833_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8013..8156)
DNA (144bp) protein (48aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WZB9_9GAMM
ATP-binding cassette protein, ChvD family
ATP-binding cassette protein, ChvD family {ECO:0000313|EMBL:AGG87934.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying 13 items

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