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scnpilot_solids1_trim150_scaffold_4215

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_4215_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..363)
DNA (363bp) protein (121aa)
Cytochrome c553 n=1 Tax=Rhodanobacter denitrificans RepID=M4NDB2_9GAMM
cytochrome c553
Cytochrome c553 {ECO:0000313|EMBL:AGG87433.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_4215_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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476..1126
DNA (651bp) protein (217aa)
Probable GTP-binding protein EngB n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W331_9GAMM
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
cell division checkpoint GTPase YihA
scnpilot_solids1_trim150_scaffold_4215_3
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1162..3756)
DNA (2595bp) protein (865aa)
putative diguanylate cyclase/phosphodiesterase (GGDEF and EAL domains) (EC:2.7.7.65) rbh
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Marichromatium purpuratum 984 RepID=F9U2Y2_MARPU
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
scnpilot_solids1_trim150_scaffold_4215_4
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3765..4238)
DNA (474bp) protein (158aa)
Tfp pilus assembly protein PilE n=1 Tax=Acidovorax sp. CF316 RepID=J0KHJ7_9BURK
Tfp pilus assembly protein PilE {ECO:0000313|EMBL:EJE53120.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
putative type II protein secretion system
scnpilot_solids1_trim150_scaffold_4215_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4420..4911)
DNA (492bp) protein (164aa)
GAF domain-containing protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NHZ0_9GAMM
GAF domain-containing protein
GAF domain-containing protein {ECO:0000313|EMBL:AGG87436.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_4215_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4941..5660
DNA (720bp) protein (240aa)
ATP-dependent dethiobiotin synthetase BioD {ECO:0000256|HAMAP-Rule:MF_00336}; EC=6.3.3.3 {ECO:0000256|HAMAP-Rule:MF_00336};; DTB synthetase {ECO:0000256|HAMAP-Rule:MF_00336}; Dethiobiotin synthase {ECO:0000256|HAMAP-Rule:MF_00336}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ATP-dependent dethiobiotin synthetase BioD n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W328_9GAMM
dethiobiotin synthase
scnpilot_solids1_trim150_scaffold_4215_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5725..6072
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WHE0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL98881.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_4215_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6133..8169
DNA (2037bp) protein (679aa)
Peptidyl-dipeptidase Dcp n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W326_9GAMM
Peptidyl-dipeptidase Dcp {ECO:0000313|EMBL:EIL93867.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Zn-dependent oligopeptidase
Displaying 8 items

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