ggKbase home page

scnpilot_solids1_trim150_scaffold_814

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_814_1
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..202)
DNA (201bp) protein (67aa)
Heavy metal efflux pump CzcA n=1 Tax=Rhodanobacter sp. 115 RepID=I4VUI8_9GAMM
Heavy metal efflux pump CzcA {ECO:0000313|EMBL:EIL90879.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
heavy metal efflux pump, cobalt-zinc-cadmium
scnpilot_solids1_trim150_scaffold_814_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(199..1365)
DNA (1167bp) protein (389aa)
RND family efflux transporter, MFP subunit n=1 Tax=Rhodanobacter denitrificans RepID=M4NK94_9GAMM
RND family efflux transporter, MFP subunit
RND family efflux transporter, MFP subunit {ECO:0000313|EMBL:AGG90482.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_814_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1355..2878)
DNA (1524bp) protein (508aa)
Efflux transporter, outer membrane factor lipoprotein, NodT family n=1 Tax=Rhodanobacter denitrificans RepID=M4NLG8_9GAMM
efflux transporter, outer membrane factor lipoprotein, NodT family
Efflux transporter, outer membrane factor lipoprotein, NodT family {ECO:0000313|EMBL:AGG90483.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_814_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3136..5994)
DNA (2859bp) protein (953aa)
TonB-dependent receptor n=1 Tax=Rhodanobacter denitrificans RepID=M4NHX9_9GAMM rbh
TonB-dependent receptor {ECO:0000313|EMBL:AGG90484.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
TonB-dependent receptor rbh
scnpilot_solids1_trim150_scaffold_814_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6058..6912
DNA (855bp) protein (285aa)
DeoR family transcriptional regulator n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WN84_9GAMM rbh
DeoR family transcriptional regulator {ECO:0000313|EMBL:EIM00926.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
transcriptional regulator of sugar metabolism rbh
scnpilot_solids1_trim150_scaffold_814_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7079..8185)
DNA (1107bp) protein (369aa)
Amidohydrolase 2 n=1 Tax=Rhodanobacter denitrificans RepID=I4WW43_9GAMM rbh
Amidohydrolase 2 {ECO:0000313|EMBL:EIM00927.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Amidohydrolase rbh
scnpilot_solids1_trim150_scaffold_814_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8299..10416
DNA (2118bp) protein (706aa)
Alpha-galactosidase n=1 Tax=Rhodanobacter denitrificans RepID=M4NK99_9GAMM rbh
alpha-galactosidase rbh
Alpha-galactosidase {ECO:0000313|EMBL:AGG90487.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_814_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10413..11432
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WN87_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIM00929.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_814_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11375..12664
DNA (1290bp) protein (430aa)
D-tagatose-bisphosphate aldolase non-catalytic subunit n=1 Tax=Rhodanobacter denitrificans RepID=I4WW46_9GAMM rbh
tagatose-bisphosphate aldolase noncatalytic subunit rbh
Tagatose-bisphosphate aldolase noncatalytic subunit {ECO:0000313|EMBL:AGG90489.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_814_10
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12645..13811
DNA (1167bp) protein (389aa)
Tagatose-6-phosphate ketose/aldose isomerase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WN89_9GAMM rbh
Tagatose-6-phosphate ketose/aldose isomerase {ECO:0000313|EMBL:EIM00931.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative phosphosugar isomerase rbh
scnpilot_solids1_trim150_scaffold_814_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13808..14779
DNA (972bp) protein (324aa)
BadF/BadG/BcrA/BcrD type ATPase n=1 Tax=Rhodanobacter denitrificans RepID=I4WW48_9GAMM rbh
putative N-acetylglucosamine kinase rbh
Putative N-acetylglucosamine kinase {ECO:0000313|EMBL:AGG90491.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_814_12
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14822..16312)
DNA (1491bp) protein (497aa)
Anthranilate synthase component I {ECO:0000313|EMBL:EIM00936.1}; EC=4.1.3.27 {ECO:0000313|EMBL:EIM00936.1};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
anthranilate synthase component I (EC:4.1.3.27)
Anthranilate synthase component I n=1 Tax=Rhodanobacter denitrificans RepID=I4WW49_9GAMM
scnpilot_solids1_trim150_scaffold_814_13
Eimeria brunetti, Eimeria, Eucoccidiorida, Coccidia, Apicomplexa, Eukaryota

Not on your lists

16442..17548
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Eimeria brunetti RepID=U6LQC5_9EIME
Uncharacterized protein {ECO:0000313|EMBL:CDJ51443.1}; TaxID=51314 species="Eukaryota; Alveolata; Apicomplexa; Conoidasida; Coccidia; Eucoccidiorida; Eimeriorina; Eimeriidae; Eimeria.;" source="Eimeria brunetti.;"
mucin-5AC-like
scnpilot_solids1_trim150_scaffold_814_14
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17552..17935)
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000345350E
Uncharacterized protein {ECO:0000313|EMBL:AHX16336.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
scnpilot_solids1_trim150_scaffold_814_15
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17993..20023)
DNA (2031bp) protein (677aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Signal transduction histidine kinase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WN95_9GAMM
signal transduction histidine kinase
scnpilot_solids1_trim150_scaffold_814_16
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20042..20617)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WW51_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90495.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_814_17
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20614..20814)
DNA (201bp) protein (67aa)
chemotaxis protein CheY n=1 Tax=Dyella ginsengisoli RepID=UPI00034D039F
Proteobacterial dedicated sortase system response regulator {ECO:0000313|EMBL:EIL98374.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
two component transcriptional regulator, winged helix family
Displaying 17 items

View Taxonomy