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scnpilot_solids1_trim150_scaffold_933

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_933_1
Ectothiorhodospira sp. PHS-1, Ectothiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..117
DNA (117bp) protein (39aa)
ahpC; alkyl hydroperoxide reductase; K03386 peroxiredoxin (alkyl hydroperoxide reductase subunit C) [EC:1.11.1.15]
Peroxiredoxin n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VMG4_9GAMM
Alkyl hydroperoxide reductase {ECO:0000313|EMBL:EHQ51987.1}; TaxID=519989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Ectothiorhodospira.;" source="Ectothiorhodospira sp. PHS-1.;"
scnpilot_solids1_trim150_scaffold_933_2
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

298..1413
DNA (1116bp) protein (372aa)
Alkyl hydroperoxide reductase subunit F n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VMG3_9GAMM
Alkyl hydroperoxide reductase subunit F {ECO:0000313|EMBL:EIL88404.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
alkyl hydroperoxide reductase, F subunit
scnpilot_solids1_trim150_scaffold_933_3
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1410..1859
DNA (450bp) protein (150aa)
Alkyl hydroperoxide reductase subunit F n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VMG3_9GAMM
Alkyl hydroperoxide reductase subunit F {ECO:0000313|EMBL:EIL88404.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
alkyl hydroperoxide reductase, F subunit
scnpilot_solids1_trim150_scaffold_933_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1945..2769
DNA (825bp) protein (275aa)
NAD-dependent protein deacetylase {ECO:0000256|HAMAP-Rule:MF_01967}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01967};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01967}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
NAD-dependent protein deacetylase n=1 Tax=Rhodanobacter thiooxydans LCS2 PF3_9GAMM">RepID=I4WPF3_9GAMM
NAD-dependent protein deacetylase, SIR2 family
scnpilot_solids1_trim150_scaffold_933_5
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2854..3312
DNA (459bp) protein (153aa)
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
methionine-R-sulfoxide reductase (EC:1.8.4.11); K07305 peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
methionine sulfoxide reductase B n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003797377
scnpilot_solids1_trim150_scaffold_933_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3309..4478
DNA (1170bp) protein (390aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VWL8_9GAMM
methionine-S-sulfoxide reductase
scnpilot_solids1_trim150_scaffold_933_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4484..5647)
DNA (1164bp) protein (388aa)
Lipase class 3 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4R8_9GAMM
Lipase class 3 {ECO:0000313|EMBL:EIL94459.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative lipase family protein
scnpilot_solids1_trim150_scaffold_933_8
Burkholderia sp. MSHR3999, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5691..6212)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Burkholderia thailandensis MSMB121 RepID=N0ANQ3_BURTH
KY49.ctg7180000000014_quiver, whole genome shotgun sequence {ECO:0000313|EMBL:KIP17851.1}; TaxID=1542965 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. MSHR3999.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_933_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6304..6522)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WRA7_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89324.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_933_10
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6659..7015
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4W0U6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93087.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_933_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7128..7973
DNA (846bp) protein (282aa)
PAS/PAC sensor-containing diguanylate cyclase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VWC9_9GAMM
PAS/PAC sensor-containing diguanylate cyclase {ECO:0000313|EMBL:EIL91520.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
PAS/PAC sensor-containing diguanylate cyclase
scnpilot_solids1_trim150_scaffold_933_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8087..9688)
DNA (1602bp) protein (534aa)
Sulfotransferase family protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NA84_9GAMM
sulfotransferase family protein
Sulfotransferase family protein {ECO:0000313|EMBL:AGG87319.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_933_13
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9893..10372
DNA (480bp) protein (160aa)
3-demethylubiquinone-9 3-methyltransferase; K00568 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
3-demethylubiquinone-9 3-methyltransferase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VTF2_9GAMM
3-demethylubiquinone-9 3-methyltransferase {ECO:0000313|EMBL:EIL90493.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
scnpilot_solids1_trim150_scaffold_933_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10471..11127
DNA (657bp) protein (219aa)
Glutathione S-transferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WS34_9GAMM rbh
glutathione S-transferase rbh
Glutathione S-transferase {ECO:0000313|EMBL:AGG89425.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_933_15
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11423..11698)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WY29_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_933_16
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11855..12085)
DNA (231bp) protein (77aa)
transcriptional regulator n=1 Tax=Streptomyces RepID=UPI0003756690
XRE family transcriptional regulator; K07727 putative transcriptional regulator
XRE family transcriptional regulator {ECO:0000313|EMBL:EQD86388.1}; TaxID=1382595 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea D.;"
scnpilot_solids1_trim150_scaffold_933_17
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12085..12591)
DNA (507bp) protein (169aa)
Transmembrane transport protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VWE4_9GAMM
Transmembrane transport protein {ECO:0000313|EMBL:EIL91535.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
transmembrane transport protein
scnpilot_solids1_trim150_scaffold_933_18
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12871..13299
DNA (429bp) protein (143aa)
UPI0003CDD734 related cluster n=1 Tax=unknown RepID=UPI0003CDD734
Aldehyde-activating protein {ECO:0000313|EMBL:KJB96726.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_933_19
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13615..15177
DNA (1563bp) protein (521aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034BB8E1 rbh
ankyrin rbh
Ankyrin {ECO:0000313|EMBL:ACQ78334.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
scnpilot_solids1_trim150_scaffold_933_20
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15285..16115)
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4W0I0_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL92971.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
scnpilot_solids1_trim150_scaffold_933_21
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16730..17563
DNA (834bp) protein (278aa)
Cytochrome c peroxidase n=1 Tax=Rhodanobacter denitrificans RepID=M4NEY6_9GAMM
cytochrome c peroxidase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_933_22
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17536..17769
DNA (234bp) protein (78aa)
Cytochrome c551 peroxidase n=1 Tax=Rhodanobacter denitrificans RepID=I4WS30_9GAMM
cytochrome c peroxidase
Cytochrome c peroxidase {ECO:0000313|EMBL:AGG89430.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_933_23
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17878..18132)
DNA (255bp) protein (85aa)
TonB-dependent receptor n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VWF0_9GAMM
TonB-dependent receptor {ECO:0000313|EMBL:EIL91541.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
TonB-dependent receptor
scnpilot_solids1_trim150_scaffold_933_24
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18301..18693
DNA (393bp) protein (131aa)
Glucose sorbosone dehydrogenase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VTG7_9GAMM
Glucose sorbosone dehydrogenase {ECO:0000313|EMBL:EIL90508.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
glucose sorbosone dehydrogenase
scnpilot_solids1_trim150_scaffold_933_25
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18703..19137)
DNA (435bp) protein (145aa)
Rifampin ADP-ribosyl transferase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VTH1_9GAMM
Rifampin ADP-ribosyl transferase {ECO:0000313|EMBL:EIL90512.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
rifampin ADP-ribosyl transferase
scnpilot_solids1_trim150_scaffold_933_26
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19375..19710)
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Meganema perideroedes RepID=UPI0003754F34
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
scnpilot_solids1_trim150_scaffold_933_27
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19881..21401)
DNA (1521bp) protein (507aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI00036965C8 rbh
hypothetical protein
Tax=BJP_08E140C01_Xanthomonadales_64_42
scnpilot_solids1_trim150_scaffold_933_28
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22434..22724
DNA (291bp) protein (97aa)
Putative alpha/beta hydrolase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3M5_9GAMM
Putative alpha/beta hydrolase {ECO:0000313|EMBL:EIL94066.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
histidine triad (HIT) protein
scnpilot_solids1_trim150_scaffold_933_29
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23009..23791
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Nevskia ramosa RepID=UPI0003B52E84
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
scnpilot_solids1_trim150_scaffold_933_30
Vibrio campbellii, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24236..25105
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Vibrio campbellii HY01 RepID=A6AK96_9VIBR
Uncharacterized protein {ECO:0000313|EMBL:EDL70757.1}; TaxID=410291 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio campbellii (strain HY01).;"
hypothetical protein
Displaying items 1-30 of 33 in total

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