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scnpilot_solids1_trim150_scaffold_3028

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_3028_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..366)
DNA (366bp) protein (122aa)
glutamyl-tRNA reductase (EC:1.2.1.70)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Glutamyl-tRNA reductase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WKN5_9GAMM
scnpilot_solids1_trim150_scaffold_3028_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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475..2223
DNA (1749bp) protein (583aa)
Flp pilus assembly protein TadD n=1 Tax=Rhodanobacter denitrificans RepID=M4NK11_9GAMM
Flp pilus assembly protein TadD
Flp pilus assembly protein TadD {ECO:0000313|EMBL:AGG88111.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_3028_3
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2220..2825
DNA (606bp) protein (202aa)
Outer-membrane lipoprotein LolB n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VJ25_9GAMM rbh
Outer-membrane lipoprotein LolB {ECO:0000256|HAMAP-Rule:MF_00233, ECO:0000256|SAAS:SAAS00002103}; Flags: Precursor;; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
outer membrane lipoprotein LolB
scnpilot_solids1_trim150_scaffold_3028_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2881..4260
DNA (1380bp) protein (460aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Rhodanobacter denitrificans RepID=M4NEX4_9GAMM
scnpilot_solids1_trim150_scaffold_3028_trna_1
unknown

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4301..4374
DNA (74bp)
transferRNA Gln
scnpilot_solids1_trim150_scaffold_3028_5
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4411..5370
DNA (960bp) protein (320aa)
Ribose-phosphate pyrophosphokinase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2S6_9GAMM
ribose-phosphate pyrophosphokinase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_3028_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5532..6227
DNA (696bp) protein (232aa)
50S ribosomal protein L25 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2S5_9GAMM
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00147491}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023359}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ribosomal protein L25, Ctc-form
scnpilot_solids1_trim150_scaffold_3028_7
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6281..6862
DNA (582bp) protein (194aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29) rbh
Peptidyl-tRNA hydrolase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2S4_9GAMM
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_3028_8
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6951..7139
DNA (189bp) protein (63aa)
GTP-binding protein YchF n=1 Tax=Xanthomonas RepID=UPI000262A3AF
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
GTP-binding protein YchF; K06942
Displaying 9 items

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