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scnpilot_solids1_trim150_scaffold_3791

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_3791_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..589)
DNA (588bp) protein (196aa)
Periplasmic serine protease, Do/DeqQ family protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WR82_9GAMM
periplasmic serine protease, Do/DeqQ family
Periplasmic serine protease, Do/DeqQ family {ECO:0000313|EMBL:AGG89346.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_3791_2
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(757..1416)
DNA (660bp) protein (220aa)
Negative regulator of sigma E activity n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPL4_9GAMM
negative regulator of sigma E activity
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_3791_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1413..2036)
DNA (624bp) protein (208aa)
RNA polymerase sigma factor RpoE n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPL3_9GAMM
RNA polymerase sigma factor RpoE {ECO:0000313|EMBL:EIM01405.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
RNA polymerase, sigma-24 subunit, RpoE
scnpilot_solids1_trim150_scaffold_3791_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2152..3183)
DNA (1032bp) protein (344aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NEW5_9GAMM
diguanylate cyclase (GGDEF) domain-containing protein
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:AGG89349.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_3791_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3150..4679)
DNA (1530bp) protein (510aa)
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPL2_9GAMM
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:EIM01404.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
diguanylate cyclase (GGDEF) domain-containing protein
scnpilot_solids1_trim150_scaffold_3791_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4690..5184)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPL1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM01403.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_3791_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5470..7527
DNA (2058bp) protein (686aa)
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.35 4.2.1.17)
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:AGG89351.1}; EC=1.1.1.35 {ECO:0000313|EMBL:AGG89351.1};; EC=4.2.1.17 {ECO:0000313|EMBL:AGG89351.1};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Putative enoyl-CoA hydratasee n=1 Tax=Rhodanobacter denitrificans RepID=I4WR77_9GAMM
scnpilot_solids1_trim150_scaffold_3791_8
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7594..8163)
DNA (570bp) protein (190aa)
Nucleoprotein/polynucleotide-associated enzyme n=1 Tax=Rhodanobacter denitrificans RepID=I4WR76_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_3791_9
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8202..8426)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WR75_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_3791_10
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8426..9055)
DNA (630bp) protein (210aa)
UDP-glucose dehydrogenase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPK7_9GAMM
UDP-glucose dehydrogenase {ECO:0000313|EMBL:EIM01399.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
nucleotide sugar dehydrogenase
Displaying 10 items

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