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scnpilot_solids1_trim150_scaffold_5879

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_5879_1
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..1486
DNA (1485bp) protein (495aa)
Major facilitator superfamily protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0A3_9GAMM
Major Facilitator Superfamily transporter
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
scnpilot_solids1_trim150_scaffold_5879_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1580..2569)
DNA (990bp) protein (330aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00180}; Short=DHBP synthase {ECO:0000256|HAMAP-Rule:MF_00180};; EC=4.1.99.12 {ECO:0000256|HAMAP-Rule:MF_00180};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
3,4-dihydroxy-2-butanone 4-phosphate synthase (EC:4.1.2.- 3.5.4.25)
3,4-dihydroxy-2-butanone 4-phosphate synthase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJ98_9GAMM
scnpilot_solids1_trim150_scaffold_5879_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2836..3291)
DNA (456bp) protein (152aa)
riboflavin synthase alpha chain (EC:2.5.1.9)
Riboflavin synthase subunit alpha n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VSH9_9GAMM
Riboflavin synthase subunit alpha {ECO:0000313|EMBL:EIL90170.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids1_trim150_scaffold_5879_4
Pseudomonas sp. M47T1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3704..4894
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. M47T1 RepID=I4N9Z7_9PSED rbh
Uncharacterized protein {ECO:0000313|EMBL:EIK98287.1}; TaxID=1179778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. M47T1.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_5879_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4941..6005)
DNA (1065bp) protein (355aa)
5-amino-6-(5-phosphoribosylamino)uracil reductase (EC:3.5.4.26 1.1.1.193) rbh
Riboflavin biosynthesis protein RibD n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJA0_9GAMM
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids1_trim150_scaffold_5879_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6156..6665)
DNA (510bp) protein (170aa)
Transcriptional repressor NrdR n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJA1_9GAMM rbh
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
transcriptional regulator NrdR
scnpilot_solids1_trim150_scaffold_5879_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6759..7055)
DNA (297bp) protein (99aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
glycine hydroxymethyltransferase (EC:2.1.2.1); K00600 glycine hydroxymethyltransferase [EC:2.1.2.1]
Serine hydroxymethyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJA2_9GAMM
Displaying 7 items

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