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scnpilot_solids1_trim150_scaffold_1033

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1033_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..310
DNA (309bp) protein (103aa)
Peptidyl-dipeptidase Dcp n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W326_9GAMM
Peptidyl-dipeptidase Dcp {ECO:0000313|EMBL:EIL93867.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Zn-dependent oligopeptidase
scnpilot_solids1_trim150_scaffold_1033_2
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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419..1477
DNA (1059bp) protein (353aa)
ATP-binding region, ATPase-like protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ41_9GAMM rbh
ATP-binding region, ATPase-like protein {ECO:0000313|EMBL:EIL89332.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
histidine kinase rbh
scnpilot_solids1_trim150_scaffold_1033_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1635..3461
DNA (1827bp) protein (609aa)
Kef-type potassium/proton antiporter, CPA2 family n=1 Tax=Rhodanobacter denitrificans RepID=M4NAF4_9GAMM
Kef-type potassium/proton antiporter, CPA2 family
Kef-type potassium/proton antiporter, CPA2 family {ECO:0000313|EMBL:AGG87444.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1033_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3475..6909)
DNA (3435bp) protein (1145aa)
Ankyrin repeat-containing protein n=3 Tax=Rhodanobacter denitrificans RepID=M4NAE4_9GAMM
ankyrin repeat-containing protein
Ankyrin repeat-containing protein {ECO:0000313|EMBL:AGG87445.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1033_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6981..7274)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WHD5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL98876.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1033_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7518..9014
DNA (1497bp) protein (499aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WHS7_9GAMM
long-chain fatty acid transport protein
Long-chain fatty acid transport protein {ECO:0000313|EMBL:AGG87447.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1033_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9086..10501)
DNA (1416bp) protein (472aa)
Aldehyde dehydrogenase n=1 Tax=Rhodanobacter denitrificans RepID=M4NDC6_9GAMM
NAD-dependent aldehyde dehydrogenase
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1033_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10561..13056)
DNA (2496bp) protein (832aa)
TonB dependent receptor n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W321_9GAMM
TonB dependent receptor {ECO:0000313|EMBL:EIL93862.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
TonB-dependent receptor, plug rbh
scnpilot_solids1_trim150_scaffold_1033_9
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13118..14335)
DNA (1218bp) protein (406aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W320_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_1033_10
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14378..15613)
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W319_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_1033_11
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15729..16820)
DNA (1092bp) protein (364aa)
AraC family transcriptional regulator n=1 Tax=Rhodanobacter sp. 115 RepID=I4W3D5_9GAMM rbh
AraC family transcriptional regulator {ECO:0000313|EMBL:EIL93976.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
AraC family transcriptional regulator
scnpilot_solids1_trim150_scaffold_1033_12
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16962..17261)
DNA (300bp) protein (100aa)
Bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase {ECO:0000313|EMBL:EIL93979.1}; EC=1.5.1.12 {ECO:0000313|EMBL:EIL93979.1};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
delta-1-pyrroline-5-carboxylate dehydrogenase (EC:1.5.1.12 1.5.99.8)
Bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W3D8_9GAMM
Displaying 12 items

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