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scnpilot_solids1_trim150_scaffold_1601

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1601_1
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(289..1242)
DNA (954bp) protein (318aa)
N-acetyltransferase GCN5 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WKC5_9GAMM
putative acyltransferase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_1601_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1239..2435)
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WKC4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL99915.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1601_3
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2457..3215)
DNA (759bp) protein (253aa)
Putative transmembrane protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VP57_9GAMM
Putative transmembrane protein {ECO:0000313|EMBL:EIL88998.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
putative permease
scnpilot_solids1_trim150_scaffold_1601_4
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3356..5230
DNA (1875bp) protein (625aa)
Sulfite reductase [NADPH] flavoprotein alpha-component {ECO:0000256|PIRNR:PIRNR000207, ECO:0000256|SAAS:SAAS00014038}; Short=SiR-FP {ECO:0000256|PIRNR:PIRNR000207};; EC=1.8.1.2 {ECO:0000256|PIRNR:PIRNR000207, ECO:0000256|SAAS:SAAS00013953};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
sulfite reductase (NADPH) flavoprotein, alpha-component (EC:1.8.1.2)
Sulfite reductase [NADPH] flavoprotein alpha-component n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VP58_9GAMM
scnpilot_solids1_trim150_scaffold_1601_5
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5314..7008
DNA (1695bp) protein (565aa)
Sulfite reductase [NADPH] hemoprotein beta-component {ECO:0000256|HAMAP-Rule:MF_01540}; Short=SiR-HP {ECO:0000256|HAMAP-Rule:MF_01540};; Short=SiRHP {ECO:0000256|HAMAP-Rule:MF_01540};; EC=1.8.1.2 {ECO:0000256|HAMAP-Rule:MF_01540};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
sulfite reductase (NADPH) hemoprotein, beta-component (EC:1.8.1.2)
Sulfite reductase [NADPH] hemoprotein beta-component n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VP59_9GAMM
scnpilot_solids1_trim150_scaffold_1601_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7005..7724
DNA (720bp) protein (240aa)
phosphoadenylylsulfate reductase (thioredoxin) (EC:1.8.4.8)
Phosphoadenosine phosphosulfate reductase {ECO:0000256|HAMAP-Rule:MF_00063, ECO:0000256|SAAS:SAAS00055482}; EC=1.8.4.8 {ECO:0000256|HAMAP-Rule:MF_00063, ECO:0000256|SAAS:SAAS00089161};; 3'-phosphoadenylylsulfate reductase {ECO:0000256|HAMAP-Rule:MF_00063}; PAPS reductase, thioredoxin dependent {ECO:0000256|HAMAP-Rule:MF_00063}; PAPS sulfotransferase {ECO:0000256|HAMAP-Rule:MF_00063}; PAdoPS reductase {ECO:0000256|HAMAP-Rule:MF_00063}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xant
Phosphoadenosine phosphosulfate reductase n=1 Tax=Rhodanobacter denitrificans RepID=I4WVD6_9GAMM
scnpilot_solids1_trim150_scaffold_1601_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7807..8748)
DNA (942bp) protein (314aa)
Peptidyl-prolyl cis-trans isomerase (Rotamase)-cyclophilin family n=1 Tax=Rhodanobacter denitrificans RepID=M4NFR0_9GAMM
peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
Peptidyl-prolyl cis-trans isomerase (Rotamase)-cyclophilin family {ECO:0000313|EMBL:AGG88458.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1601_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8897..9259
DNA (363bp) protein (121aa)
PadR family transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W639_9GAMM
PadR family transcriptional regulator {ECO:0000313|EMBL:EIL94930.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative transcriptional regulator
scnpilot_solids1_trim150_scaffold_1601_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9256..10188
DNA (933bp) protein (311aa)
Sensor protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W640_9GAMM
Sensor protein {ECO:0000313|EMBL:EIL94931.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
sensor protein
scnpilot_solids1_trim150_scaffold_1601_10
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10185..10631
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W7I3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL95424.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1601_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10669..10956)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W643_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94934.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids1_trim150_scaffold_1601_12
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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11084..11692
DNA (609bp) protein (203aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WMD1_9GAMM
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:EIM00623.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
methyltransferase family protein
scnpilot_solids1_trim150_scaffold_1601_13
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11767..12594
DNA (828bp) protein (276aa)
Oligopeptide transporter, OPT family protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WD57_9GAMM
Oligopeptide transporter, OPT family protein {ECO:0000313|EMBL:EIL97398.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative oligopeptide transporter, OPT family
Displaying 13 items

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