ggKbase home page

scnpilot_solids1_trim150_scaffold_1027_30

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_68_47

partial RP 5 / 55 BSCG 8 / 51 ASCG 5 / 38
Location: 33287..33547

Top 3 Functional Annotations

Value Algorithm Source
Transposase, IS4 family n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q11ZL6_POLSJ similarity UNIREF
DB: UNIREF100
  • Identity: 70.5
  • Coverage: 78.0
  • Bit_score: 110
  • Evalue 7.60e-22
IS4 family transposase similarity KEGG
DB: KEGG
  • Identity: 70.5
  • Coverage: 78.0
  • Bit_score: 110
  • Evalue 2.40e-22
Transposase, IS4 family {ECO:0000313|EMBL:ABE47276.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.5
  • Coverage: 78.0
  • Bit_score: 110
  • Evalue 1.10e-21

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Polaromonas sp. JS666 → Polaromonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 261
ATGAACACTGGCAAGACGCTGTTCGCTCAACTCATGGAGTTGGTTTCGCGGACCAGCGTTGCTCGCATCGTCAAACGTCATGGTGGCAACAGGCGGGTTTGCAGTTTCAACTGCACCGAGCAGTTCCGGGTCATGGCCTTCGCCCAGCTGAGTTGGCGCGAGAGCCTGCGCGACATCGAGGCGGTTCTGGTTGTCAACGCCGGCAAACTCTCCGGCATGGGTCTGCGTCATGCCGGAGAGGGTGTGCAGAATTCTGTGTAA
PROTEIN sequence
Length: 87
MNTGKTLFAQLMELVSRTSVARIVKRHGGNRRVCSFNCTEQFRVMAFAQLSWRESLRDIEAVLVVNAGKLSGMGLRHAGEGVQNSV*